Gene
| Gene Model ID | pfu_aug2.0_596.1_20957 |
|---|---|
| Locus | scaffold596.1 : 175176 ... 179003 : + |
| To GenomeBrowser | scaffold596.1:175176..179003 |
| Genes list of scaffold | scaffold596.1 |
| Synonym | pfu_aug1.0_30270.1_40793 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_596.1_20957.t1 | 1 | 1 | Bravo_FIGEY | 17 | 65 | 1.5e-14 | 54.6 | 1.1e-18 | 1.7e-14 | 54.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_596.1_20957.t1 | gi|260822511|ref|XP_002606645.1| | hypothetical protein BRAFLDRAFT_120092 [Branchiostoma floridae] | 3.0e-07 |
| pfu_aug2.0_596.1_20957.t1 | gi|308447952|ref|XP_003087570.1| | hypothetical protein CRE_31657 [Caenorhabditis remanei] | 3.0e-07 |
| pfu_aug2.0_596.1_20957.t1 | gi|86565332|ref|NP_001033394.1| | SAX-7, isoform a [Caenorhabditis elegans] | 2.0e-06 |
| pfu_aug2.0_596.1_20957.t1 | gi|641660084|ref|XP_008181361.1| | PREDICTED: neuroglian isoform X1 [Acyrthosiphon pisum] | 2.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_596.1_20957.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_596.1_20957.t1 atgaaagattggaatagatataatgctgtatgttttagtggcgagaagcagccgttggccggtagccctgattatgatcc agataaaggtgggccagatagtgagaaggatagcctggaggactacggagatgtcgaccccagcaaatttaacgaagatg gatcatttataggccaatatggaccagataaagctacagcgtcagaaattataattttagcttctacatgggttttatta gtcccaaccacccgtaccgacagatctgaaactctacaaagttctatatgtttgtactga |
|
Protein
| Protein ID | pfu_aug2.0_596.1_20957.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_596.1_20957.t1 MKDWNRYNAVCFSGEKQPLAGSPDYDPDKGGPDSEKDSLEDYGDVDPSKFNEDGSFIGQYGPDKATASEIIILASTWVLL VPTTRTDRSETLQSSICLY |
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