Gene
| Gene Model ID | pfu_aug2.0_596.1_20960 |
|---|---|
| Locus | scaffold596.1 : 213217 ... 220739 : + |
| To GenomeBrowser | scaffold596.1:213217..220739 |
| Genes list of scaffold | scaffold596.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_596.1_20960.t1 | 2 | 1 | Sod_Cu | 51 | 84 | 3.7e-37 | 127.6 | 0.082 | 1200.0 | -0.5 |
| pfu_aug2.0_596.1_20960.t1 | 2 | 2 | Sod_Cu | 115 | 261 | 3.7e-37 | 127.6 | 2.50006e-41 | 3.7e-37 | 127.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_596.1_20960.t1 | gi|645035824|ref|XP_008216838.1| | PREDICTED: superoxide dismutase [Cu-Zn] 4A-like isoform X1 [Nasonia vitripennis] | 1.0e-34 |
| pfu_aug2.0_596.1_20960.t1 | gi|345481696|ref|XP_001602916.2| | PREDICTED: superoxide dismutase [Cu-Zn] 4A-like isoform X2 [Nasonia vitripennis] | 1.0e-34 |
| pfu_aug2.0_596.1_20960.t1 | gi|759064454|ref|XP_011341630.1| | PREDICTED: superoxide dismutase [Cu-Zn], chloroplastic-like isoform X3 [Cerapachys biroi] | 2.0e-34 |
| pfu_aug2.0_596.1_20960.t1 | gi|759064452|ref|XP_011341629.1| | PREDICTED: superoxide dismutase [Cu-Zn], chloroplastic-like isoform X2 [Cerapachys biroi] | 3.0e-34 |
| pfu_aug2.0_596.1_20960.t1 | gi|759064450|ref|XP_011341628.1| | PREDICTED: superoxide dismutase [Cu-Zn], chloroplastic-like isoform X1 [Cerapachys biroi] | 5.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_596.1_20960.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_596.1_20960.t1 atggagaattatattctatgcattttcctgacagtgtttcaagtatacgctatcgttccaacttcttcacaaaacaaaga caccatccaatcagagcaccatgacatgtccgccaaaatagcctcattgacagctaacttaacggcactatggaaattat acaatagcgggcacgctgctcatgttactgataagaattcggccaatggggccactgtcaacatacggcttaatttagag aacggacagacaagtgtggctaatgacgaggaaagagcagggcccatccacgcacactgttctatggtacccagtactca tatgccaagcaccgtaaaacagatccatgacatcagagggaatgttaatatggtacagcaggacaaaaacagtccgttag aggtggatatccagttgagcgggtttaacattacgggagtagccagtggagtaatgcgggctcacgggttccatcttcat acgtatggtaacatggagagaggatgtgagtctttaggacctcattggaatccagaaaaggttcctcatggagcacccaa cgctgtaattagacaccatgctgacctcggaaacatttattctgatgacaaaggagtggtcaacatgaagataacagacc atttagctacaatgtttggtgtcaacacaatcatagggcgctccattacgatacacgagggagaggatgacatgggattg agtggattacctgccagtatacgtggaggaaacgctggaccaaaagtggcttgttgtgtgattggattggctaaaccacc tggtccaaactaa |
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Protein
| Protein ID | pfu_aug2.0_596.1_20960.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_596.1_20960.t1 MENYILCIFLTVFQVYAIVPTSSQNKDTIQSEHHDMSAKIASLTANLTALWKLYNSGHAAHVTDKNSANGATVNIRLNLE NGQTSVANDEERAGPIHAHCSMVPSTHMPSTVKQIHDIRGNVNMVQQDKNSPLEVDIQLSGFNITGVASGVMRAHGFHLH TYGNMERGCESLGPHWNPEKVPHGAPNAVIRHHADLGNIYSDDKGVVNMKITDHLATMFGVNTIIGRSITIHEGEDDMGL SGLPASIRGGNAGPKVACCVIGLAKPPGPN |
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