Gene
| Gene Model ID | pfu_aug2.0_597.1_24206 |
|---|---|
| Locus | scaffold597.1 : 16667 ... 20925 : - |
| To GenomeBrowser | scaffold597.1:16667..20925 |
| Genes list of scaffold | scaffold597.1 |
| Synonym | pfu_aug1.0_1003.1_58343 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_597.1_24206.t1 | 4 | 1 | AIG1 | 2 | 139 | 1.8e-32 | 112.2 | 1.2e-36 | 1.8e-32 | 112.2 |
| pfu_aug2.0_597.1_24206.t1 | 4 | 2 | AIG1 | 191 | 228 | 1.8e-32 | 112.2 | 0.071 | 1100.0 | -1.5 |
| pfu_aug2.0_597.1_24206.t1 | 4 | 3 | AIG1 | 282 | 315 | 1.8e-32 | 112.2 | 1.0 | 15000.0 | -5.5 |
| pfu_aug2.0_597.1_24206.t1 | 4 | 4 | AIG1 | 377 | 435 | 1.8e-32 | 112.2 | 0.0014 | 21.0 | 4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_597.1_24206.t1 | gi|542254581|ref|XP_005463031.1| | PREDICTED: GTPase IMAP family member 4-like [Oreochromis niloticus] | 2.0e-30 |
| pfu_aug2.0_597.1_24206.t1 | gi|542260660|ref|XP_005465367.1| | PREDICTED: golgin subfamily A member 6-like protein 2-like [Oreochromis niloticus] | 6.0e-28 |
| pfu_aug2.0_597.1_24206.t1 | gi|573898457|ref|XP_006636962.1| | PREDICTED: trichohyalin-like [Lepisosteus oculatus] | 6.0e-28 |
| pfu_aug2.0_597.1_24206.t1 | gi|542224540|ref|XP_005451618.1| | PREDICTED: golgin subfamily A member 6-like protein 1-like [Oreochromis niloticus] | 1.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_597.1_24206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_597.1_24206.t1 atgaaagagattgtgaaatgcataggtatcactagtccgggtcttcatgccattgtattagtggtaaacattggtcgttt cacagaggaggaaaagaagacagttgacctgtttctgagctatttaggtcagcaactgattcaatttctggtggttgttt ttaccaggaaagatgacttggaccgggaaaatactacgattgataagtatgtggataaccttgagccgtcttcattgctc gcagatataattcagaaaagtagacgtcgatatgtcgcatttgacaacactgcaactggagaacgaaatgatgatcaagt caaaagattgttttttgtaatagaaaacttgattcgagagaatggaggttcattctacacgaataacatgtatagagaag cagagatggcattaagacgccgaataaatgaagagagcaagcgcattgaagaagaaaaaaggcaggcaattgagaagata atagctccttataaaagcaaattagaagatgaacgtcgagaacgcgaatcattgtccaaacttttagcgataagcaaaga gaaaactacatctcttactcaagacatgtcacagatgacaaaagagatagaaaaaataagacgtcaatcggaaagacagg ctgctgagagtgaaaccgagaagaggcggatggaggagaagataagacgagaaaaagaaaagagcgagagaagaatcagg gaattgaccgaggaatttcaacgaaaggatgatgatagaagaagagaatataattatatgcaacgccatatggaagacga ccttagaagagctaaagaggaactaaaaacagagcaagaaaagctagagaaaagattgtctgaacaacacataaaacatt tagaaagtgtgaagggggaatcaatgattgaaatactagaaacaaagaagcgtcaactcgaaaaagaggaagctgagaga gaaagcgagaaaaggcgaatgatagaggaacagaaaagagatcaagaaatatacgagaaagagataaggaaattgaaaga gcaaatgcaaagaaaagatgatgaaaacagaagagaatatgatcggaagcagcgacaaattgaagacgatcgcaaaaaag ataaagaggatcaaaaagcagaacaagaaaagcttgagaaacggttgtctgaaaagcacaagaaagaactagaaagtgtg attgagaagtatgataaaaagatggatgtcaacaagatcagggaaaatacaagagatgaagtccagaaagaaaaatcagg attaatcggaattcttctcgacgtagtgtctgaaataccagtagttgggacgattgtaaaggtcggaaggaaattgtgga atgacattaaccctttctctacctaa |
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Protein
| Protein ID | pfu_aug2.0_597.1_24206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_597.1_24206.t1 MKEIVKCIGITSPGLHAIVLVVNIGRFTEEEKKTVDLFLSYLGQQLIQFLVVVFTRKDDLDRENTTIDKYVDNLEPSSLL ADIIQKSRRRYVAFDNTATGERNDDQVKRLFFVIENLIRENGGSFYTNNMYREAEMALRRRINEESKRIEEEKRQAIEKI IAPYKSKLEDERRERESLSKLLAISKEKTTSLTQDMSQMTKEIEKIRRQSERQAAESETEKRRMEEKIRREKEKSERRIR ELTEEFQRKDDDRRREYNYMQRHMEDDLRRAKEELKTEQEKLEKRLSEQHIKHLESVKGESMIEILETKKRQLEKEEAER ESEKRRMIEEQKRDQEIYEKEIRKLKEQMQRKDDENRREYDRKQRQIEDDRKKDKEDQKAEQEKLEKRLSEKHKKELESV IEKYDKKMDVNKIRENTRDEVQKEKSGLIGILLDVVSEIPVVGTIVKVGRKLWNDINPFST |
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