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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_597.1_24210
Locus scaffold597.1 : 109746 ... 140710 : +
To GenomeBrowser scaffold597.1:109746..140710
Genes list of scaffold scaffold597.1
Synonym pfu_aug1.0_41791.1_12471

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_597.1_24210.t1 gi|524876751|ref|XP_005095086.1| PREDICTED: 80 kDa MCM3-associated protein-like [Aplysia californica] 0.0
pfu_aug2.0_597.1_24210.t1 gi|556983195|ref|XP_005997746.1| PREDICTED: 80 kDa MCM3-associated protein [Latimeria chalumnae] 0.0
pfu_aug2.0_597.1_24210.t1 gi|260794593|ref|XP_002592293.1| hypothetical protein BRAFLDRAFT_71033 [Branchiostoma floridae] 0.0
pfu_aug2.0_597.1_24210.t1 gi|584026215|ref|XP_006807686.1| PREDICTED: germinal-center associated nuclear protein-like isoform X1 [Neolamprologus brichardi] 0.0
pfu_aug2.0_597.1_24210.t1 gi|584026217|ref|XP_006807687.1| PREDICTED: germinal-center associated nuclear protein-like isoform X2 [Neolamprologus brichardi] 0.0

Transcript
Transcript IDpfu_aug2.0_597.1_24210.t1
Definition-
>pfu_aug2.0_597.1_24210.t1
atgtctaatccatttggtggtacaggggccttcggacagcagtcctttggagctacaacaggcaccacgtttggaacaca
gagcacaggtcagtcttcaatttttgggcagtcaaatccatcaccaggagttgcgtttggatcacaaaataatgcaggcc
ctggatttggaacatcaagtggcttcaagtttggatcaccggcaggtcaaacatctacatttggtgcctcgtcccagtct
ggttcaccattcggaagtggaataacatcaccaacagcaaatagtcaaccgtttggaaatgttggacagacaacaagtag
cacatttggtacctttggtcaacagtcaacctcttcccctatgtttggacaacagagcactagttctcctatatttggga
caggatcatcctccacgtctccttttggccagcctaaatcatcatcatttggtcagaattcctcctcccctttcggccag
actggtcagtccacttttggcttgcctggtcagtccacttttggccagcctggtcagtccacttttggccaaactggtca
gtccactttaggccagactggtcagtccacttttagtcagcctagtcagtccacttttggccagcctagtccatcctctt
ttggtcagactggtcagtccacttttggccagcccattcagtccacatttggccagactggtcagtccacttttggtcag
cctattcaatccacatttggccaacaagcagctcctggaggatttggacaaacaaagtctgtgtttggttcaccttcctt
cggtcagacgaatactacaactgtagcttctgggcacagcaccaacaattctatgtttagtggatcaccaaacatacctg
ctacatcaccatttggtcagcagtccacggtgtcctctttcggtcaatcatttgggcatacaactctaagtggtcaggga
agtagtttgtttggaggtacaaataattcactcatcaatagagctgtgacttcttcctttggaaatccacttgtgacaac
cagtcagagtgtttttggtgtttcaacaaccaatcagagtgtgtttggaggagctaagacaaacacagttcctagcatat
ttggaggagttgcctcaagtcagaatccttttggagggacctcaaataacatcacaggcactggaacatcagtatttgga
ggaacaaatgtaactcaaggtaaaactgtatttggtggtgcatctggaattggaacagggaaaacaggaggctcatctgg
actttccactggatcaggtgctggatttcatactggatcaagtgctggaacatctgggtttccctccggattaagttctg
gaacatctggatttcctactggaacaagtgctgggacatctggatttgcaactggaacaagtgctgggacatctgggttt
cccactggaacagggactggatttccctctggatcaggaacaggatttcctacaggtcctggtaatacaacctccttctc
tgggacctcaccaaaagtaacccagacaacctttggcagtcctacttcttccaccagcacacaagtcgggggaacaggac
cttcaagttcaatgagtggcgcgccctctggaaacctctttggaacaataaagcaggaggtagctgaggacaagaaacca
ttgggttttaatgtgacggccaggaggctaagtgcacaagaggagaaacaactcatcccaccggccactgttttcctaat
aaataatcctgaaatgaaaccaattacagctgttgcagatattaagaaagaaccacagagcagcagtggactgtttggaa
agactataaaacaagaaccaaatcagtgtgtgtcaggttttggatttggaaagacaaatgatgaggagtcaaaagccgac
ttgtttggcaaacaaacagacaagacttcagcaggtacaaagagaccattaacagggccaccaaaaactttgtttggaaa
agctatagagcaaacaggtcagcaaggtcaggttaggggtcaaaaggaggagcctcagaaaaaccgattttcatggaaac
gtaaagaagcaggtcagccggagagtagtaaatcagttcgaaaaccaagtgatgaaacagtggatgaagagcctagggcc
aagcgagcttctctagttcgtatgacatcaacagaagaccagagtcgtgtcgctatcatctgtaagaacgtaccagcaag
attcaacaatgctttcatgctgaagaaacactttgggcagtttggacagatatcaaggattttcccaaacccaaccaagg
ctacagctactgttcatttcagaacacatgaggcagctgtagaagccaagcggaggggtaggttgatagagaagggtgtc
cggcccatggacatattctggagtacctactctccagccgggtcaagagtctggaagatgcaaagattagaaaggcctgg
agagggtgacagtggcagagccagggcagaaagacccggtgaggcagatggtggcagagtcagggtggggtcctctcgac
actctagtcctgtacctggaccctcttcatcggactcatcagtggctgtgaaaaaaattgacaaaggatccatatcagtt
ttgaaaacaactgttgtccataacagcacagataaactgaacatgttgaatttacgagataaaatactgaggatgggaac
aaagcgcacagctgatcttgcagctaaagcttttgttggtacatgtgaggacatgtgtcctgagaaagaaagatatgacc
gagaagaaaaaaggcgactgcatacctatgaagttctacgtgggacagaatcaaatccccaagttgatcacacacgagcc
gtgaaggagtacagtagatcttctgctgatcaggaggagcctctttccaatgagttacgcaccctccccacattgacgac
caccatgaactatctcctaacagtgattgccgaactgggggaggatggaaagtggggagattggtttgatttcttatgga
acagaaccaggggaatcagaaagattggtaaaacaaggctcattcctctgtgcctgcattatgcacaggttccgttagat
gatcttgtacgtacgctgggatttgaagacaagtcggaagctggtcagttctgttctttctatggcctgcagacagatgg
taataatgtcaccatggataaatcggcatatgatgaaccagaggagaaatggtgtcctagaaggtcacccagcctgatag
agtctaaatgtatgattaaagtgggcgaggctataaatggtgaaccactccctccattgactttaccttcaccaagtagc
agttttgatcagaatggtagattcattggtaaacttgacgtacaagtaacagattcccctgttaagacagccttaccaca
gagcaaacctgccgattctaccaccgtgatacctcccgcccaatcattatctccagccaaggaacaaacctcttcacaga
cagcagtcagaccaaaaccgctcatattcacaaacgaagatgtgaaggagacggccaagcagttattctgggaggtgata
gatggacactgtgacagcatcgctatggaagtcatgagagatgttggaaaactgatggaaataagtgtggatatcgctaa
tgatatcactactgaagttgtacaggagatctcacaaatgctaggacagtcgctgatagcagaactagaaaaagtagaga
aagaaaaaagagtaaatagatgtgcagttgtcataacaacagaaattttaaaagaggtgctggatcaggagatactcaat
acggctacaatagaaatgagggaagtgaaaggaatacttaagaaacaactgatagagaaatgtacccaaatgttgtcaga
ggaaattctagatgacgttgtcggagagatgtcactctccgtttccagggatgtacatttcactgatgtcatagagagaa
ttagagaactggaggaaatacaacgtaaagtttgtttgataagaacccagcattggttagacagatggaaaaaagagtat
gcagcaaggaagaaactgaagcgatccatgatgggatttccttctggacctatgtttagtctggcggagtctgtagaatt
attgtccggtagatccccgaacactgatcaagattttaagtatgacagtgaaaggccacatattgaatcaccaaaggaaa
ggcttgcaaaagaaaaagcaacagaaaaagtgtataaagcacaacagatgttgaaaaatgcctgtcaccttagagcttgg
catcctgtagatatggtacgagtagcagagagaggcttagaagaactaggagatacttttaatgttaaatataaaggtaa
atatccgtggaagtatctatacttgaaactgattatatcactacctgatgccaactctgtaaagactgagcaccaaggcc
aggcagaagaacatctacaatcatggctcaagtcaaaactatcacgggacaaatgtcttcacactgctaccgagagtact
cccaggaaccagatatggagtttgtacaccacagatttgccgtcttgtacgaagcttaagcacagacagatgtgcgtgtg
cgtgagagccgtacaaggagagatacaagattttacgtcttctctgctgggcactacagctgtcctctttgtactaccac
ctgctatatcagaagatccggagttgtttgatagaggactagagtggttaatatcccattgtccttccccaccaccactc
tgtgtacaaacactgagggactttgtcactggatttttggatagagccttcttcagacctgtattacatgatctagaatg
gaggaaagctgaaggatatctacatcaggatatggacagtttaataggactatttaataatgtggttagccgtatggtag
aacttgtcaaggaatcatcaccacttacacattcatggccgccagctgaaatggctcagtctgacacaccaccaaatgag
cttccatctgtcagctggagcagtagagcttatcaaagtaggctcgagaaggctctcaggagcctatacctgccatggtt
tgacgatagtgacacaggaagctgtgattggtcagtagcttgtcaggacatcggaaattatattctaaagatccaaggag
acaacagagtagaggcagctgagctcatcagaagggtagaaatgaggattcgacatggcaagtgtgattttaatgaaatg
tgccgtgcagcttttggtgaggaagggattgaacctctctatgacaatgtaccgtggactgatataatgttagactgtat
aaactacaaagtgagagttatggactgtatggaacattcttcaaatctccctgaggccagagaggggatagagatgaagg
ttgtatatgaggactcggagcttcagaggttactgagacaggtatactggcaggactcacagaaagtcgacagctctgaa
gttaccattgacgtcacattgaagttagcaagagagaaataccatatatcccagaatgctaaacagaagattgttaccat
tgaagaaacatcctcctcagctataggattttcaatagacccgatgagtgaatcaaaactgcaggcaagaaagactgctt
atgacctggaatctactcttgagattgagaggcgagaatcagagaggttggaaagggagctccaaatatcgttaaaatca
ggaaatctacagatggaaataccgcatttagaaaatggtgacactgtcgataaaaaagatggttcatttaattctaaggg
taatttgtctgtatgggagaaaattcatgaacttgaagaaaaagtaggagtagagaaatcggcaaatgatgagtttgaga
gagagttagaagatttgatagccaaaggaaatgtagatctccctgaattcttaacttacaatgcttag

Protein
Protein IDpfu_aug2.0_597.1_24210.t1
Definition-
>pfu_aug2.0_597.1_24210.t1
MSNPFGGTGAFGQQSFGATTGTTFGTQSTGQSSIFGQSNPSPGVAFGSQNNAGPGFGTSSGFKFGSPAGQTSTFGASSQS
GSPFGSGITSPTANSQPFGNVGQTTSSTFGTFGQQSTSSPMFGQQSTSSPIFGTGSSSTSPFGQPKSSSFGQNSSSPFGQ
TGQSTFGLPGQSTFGQPGQSTFGQTGQSTLGQTGQSTFSQPSQSTFGQPSPSSFGQTGQSTFGQPIQSTFGQTGQSTFGQ
PIQSTFGQQAAPGGFGQTKSVFGSPSFGQTNTTTVASGHSTNNSMFSGSPNIPATSPFGQQSTVSSFGQSFGHTTLSGQG
SSLFGGTNNSLINRAVTSSFGNPLVTTSQSVFGVSTTNQSVFGGAKTNTVPSIFGGVASSQNPFGGTSNNITGTGTSVFG
GTNVTQGKTVFGGASGIGTGKTGGSSGLSTGSGAGFHTGSSAGTSGFPSGLSSGTSGFPTGTSAGTSGFATGTSAGTSGF
PTGTGTGFPSGSGTGFPTGPGNTTSFSGTSPKVTQTTFGSPTSSTSTQVGGTGPSSSMSGAPSGNLFGTIKQEVAEDKKP
LGFNVTARRLSAQEEKQLIPPATVFLINNPEMKPITAVADIKKEPQSSSGLFGKTIKQEPNQCVSGFGFGKTNDEESKAD
LFGKQTDKTSAGTKRPLTGPPKTLFGKAIEQTGQQGQVRGQKEEPQKNRFSWKRKEAGQPESSKSVRKPSDETVDEEPRA
KRASLVRMTSTEDQSRVAIICKNVPARFNNAFMLKKHFGQFGQISRIFPNPTKATATVHFRTHEAAVEAKRRGRLIEKGV
RPMDIFWSTYSPAGSRVWKMQRLERPGEGDSGRARAERPGEADGGRVRVGSSRHSSPVPGPSSSDSSVAVKKIDKGSISV
LKTTVVHNSTDKLNMLNLRDKILRMGTKRTADLAAKAFVGTCEDMCPEKERYDREEKRRLHTYEVLRGTESNPQVDHTRA
VKEYSRSSADQEEPLSNELRTLPTLTTTMNYLLTVIAELGEDGKWGDWFDFLWNRTRGIRKIGKTRLIPLCLHYAQVPLD
DLVRTLGFEDKSEAGQFCSFYGLQTDGNNVTMDKSAYDEPEEKWCPRRSPSLIESKCMIKVGEAINGEPLPPLTLPSPSS
SFDQNGRFIGKLDVQVTDSPVKTALPQSKPADSTTVIPPAQSLSPAKEQTSSQTAVRPKPLIFTNEDVKETAKQLFWEVI
DGHCDSIAMEVMRDVGKLMEISVDIANDITTEVVQEISQMLGQSLIAELEKVEKEKRVNRCAVVITTEILKEVLDQEILN
TATIEMREVKGILKKQLIEKCTQMLSEEILDDVVGEMSLSVSRDVHFTDVIERIRELEEIQRKVCLIRTQHWLDRWKKEY
AARKKLKRSMMGFPSGPMFSLAESVELLSGRSPNTDQDFKYDSERPHIESPKERLAKEKATEKVYKAQQMLKNACHLRAW
HPVDMVRVAERGLEELGDTFNVKYKGKYPWKYLYLKLIISLPDANSVKTEHQGQAEEHLQSWLKSKLSRDKCLHTATEST
PRNQIWSLYTTDLPSCTKLKHRQMCVCVRAVQGEIQDFTSSLLGTTAVLFVLPPAISEDPELFDRGLEWLISHCPSPPPL
CVQTLRDFVTGFLDRAFFRPVLHDLEWRKAEGYLHQDMDSLIGLFNNVVSRMVELVKESSPLTHSWPPAEMAQSDTPPNE
LPSVSWSSRAYQSRLEKALRSLYLPWFDDSDTGSCDWSVACQDIGNYILKIQGDNRVEAAELIRRVEMRIRHGKCDFNEM
CRAAFGEEGIEPLYDNVPWTDIMLDCINYKVRVMDCMEHSSNLPEAREGIEMKVVYEDSELQRLLRQVYWQDSQKVDSSE
VTIDVTLKLAREKYHISQNAKQKIVTIEETSSSAIGFSIDPMSESKLQARKTAYDLESTLEIERRESERLERELQISLKS
GNLQMEIPHLENGDTVDKKDGSFNSKGNLSVWEKIHELEEKVGVEKSANDEFERELEDLIAKGNVDLPEFLTYNA

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