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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_599.1_30954
Locus scaffold599.1 : 24226 ... 26074 : +
To GenomeBrowser scaffold599.1:24226..26074
Genes list of scaffold scaffold599.1
Synonym pfu_aug1.0_35888.1_19574

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_599.1_30954.t1 1 1 rve 47 150 8.9e-23 80.6 3.9e-26 1.4e-22 79.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_599.1_30954.t1 gi|585667252|ref|XP_006817281.1| PREDICTED: uncharacterized protein K02A2.6-like [Saccoglossus kowalevskii] 0.0

Transcript
Transcript IDpfu_aug2.0_599.1_30954.t1
Definition-
>pfu_aug2.0_599.1_30954.t1
atgaaatcacttgcgcgaagctacatgtggtggccaggtatcgatagcgatattgaaagattagctaaagaatgcgcagg
ttgtcaaaagcagcaaaataatccaggcaaggtttatgttcacccatgggaatggccaagcacaccatggcagagagtcc
atatagattttgctggaccgttttttattttggtggatgcgcactcgaaatggccggaagtgattcctatgaagagaatt
acgacggcgagaacaattgaggttctgagaacgattttctcaaggaatggaataccagaacagatagtttcggacaacgg
accacagtttacatccgcagaattcggacagtttatgaataacaatgcgataaggcattacaaatcagcgccttaccatc
cagcgacgaatggacttgctgaacgatttgttcaaacttttaaaagaagtatcaaatcaatgaaacatgacagcatgtca
ttaacatga

Protein
Protein IDpfu_aug2.0_599.1_30954.t1
Definition-
>pfu_aug2.0_599.1_30954.t1
MKSLARSYMWWPGIDSDIERLAKECAGCQKQQNNPGKVYVHPWEWPSTPWQRVHIDFAGPFFILVDAHSKWPEVIPMKRI
TTARTIEVLRTIFSRNGIPEQIVSDNGPQFTSAEFGQFMNNNAIRHYKSAPYHPATNGLAERFVQTFKRSIKSMKHDSMS
LT

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