Gene
| Gene Model ID | pfu_aug2.0_599.1_30956 |
|---|---|
| Locus | scaffold599.1 : 29376 ... 44057 : + |
| To GenomeBrowser | scaffold599.1:29376..44057 |
| Genes list of scaffold | scaffold599.1 |
| Synonym | pfu_aug1.0_5997.1_31104 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_599.1_30956.t1 | 1 | 1 | OSCP | 172 | 312 | 1.4e-29 | 103.1 | 2.8e-33 | 2.1e-29 | 102.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_599.1_30956.t1 | gi|524885581|ref|XP_005099396.1| | PREDICTED: ATP synthase subunit O, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_599.1_30956.t1 | gi|676474439|ref|XP_009060150.1| | hypothetical protein LOTGIDRAFT_183079 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_599.1_30956.t1 | gi|118783961|ref|XP_313357.3| | AGAP003599-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_599.1_30956.t1 | gi|752862574|ref|XP_011263581.1| | PREDICTED: ATP synthase subunit O, mitochondrial [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_599.1_30956.t1 | gi|291221347|ref|XP_002730685.1| | PREDICTED: ATP synthase subunit O, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_599.1_30956.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_599.1_30956.t1 atgcgcggtgatacgatttgggccatgaatgttgaggaggagagtttcaagtatttttttgactatagacctaaaagagt aacatttgggtatataagactcggtcatgaatgtaacgcctcggacagccacgtttttactgatgcggtgtgtaaaatta gaatcatcactgacgacgaacaggtggcatttgttgaatcgtttaacgaagtttttagtcgaggggaagagattattagc gaattgatgacgagaggaagtgaatattctcaagccattgagtgtcatcataagaatgcattaaaaattcttagcaagtt ttggaaagaaaaagcagacacttttaatattgaaaaagcaatgacatttcaaaaatttgatttctttatttttctattgc agaggaatccccatgttaagcgcccgttaggcaaacntagattggtgaggcagtttagcacatctactgtctgtagaaaa atcgtacagcctccaatacaagtctatggtctagagggaaactatgccacagctctctactcggcagcatctaaggaaaa gaaagtagatgtagtggagaaagacctcgcatctttccgtgagttattaaagaaagatgtcaaatttgcagacttcttgc tagatccaactcagaataaaaaagtcaagaaagaaatgatggacaaagttgtgaagaaaatgaactattccagtcttaca gcaaatcttgttgatgccttgtcagaaaatggtaggattaacagactagatgctgtcgtcaaagctttctcaaaaatcat gagtgctcacagaggagaggtcctatgtactgtaatcacagctcagccccttgacgatgcttcttcaaaagaattagaag gagcacttaaaggcttcttgaaggctggccagaaacttcagatagagaaagaggatacaactttgactggttga |
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Protein
| Protein ID | pfu_aug2.0_599.1_30956.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_599.1_30956.t1 MRGDTIWAMNVEEESFKYFFDYRPKRVTFGYIRLGHECNASDSHVFTDAVCKIRIITDDEQVAFVESFNEVFSRGEEIIS ELMTRGSEYSQAIECHHKNALKILSKFWKEKADTFNIEKAMTFQKFDFFIFLLQRNPHVKRPLGKXRLVRQFSTSTVCRK IVQPPIQVYGLEGNYATALYSAASKEKKVDVVEKDLASFRELLKKDVKFADFLLDPTQNKKVKKEMMDKVVKKMNYSSLT ANLVDALSENGRINRLDAVVKAFSKIMSAHRGEVLCTVITAQPLDDASSKELEGALKGFLKAGQKLQIEKEDTTLTG |
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