Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_599.1_30964
Locus scaffold599.1 : 178525 ... 199823 : +
To GenomeBrowser scaffold599.1:178525..199823
Genes list of scaffold scaffold599.1
Synonym pfu_aug1.0_4590.1_30731

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_599.1_30964.t1 gi|524867613|ref|XP_005090615.1| PREDICTED: uncharacterized protein LOC101845595 [Aplysia californica] 0.0
pfu_aug2.0_599.1_30964.t1 gi|676492195|ref|XP_009065842.1| hypothetical protein LOTGIDRAFT_236582 [Lottia gigantea] 0.0
pfu_aug2.0_599.1_30964.t1 gi|17536963|ref|NP_494447.1| CLEC-122 [Caenorhabditis elegans] 7.0e-06

Transcript
Transcript IDpfu_aug2.0_599.1_30964.t1
Definition-
>pfu_aug2.0_599.1_30964.t1
atggcggcacaagctcgtgattacagtagaagctacgatagcaggcctagaccagttagtaaaggatgtaaggactgcaa
tgtcgaaggcgtcctctttccaggaggccaagactttgactacagaagaggctgtcgtgagatgactggatgtacatgca
attgtgacggcagctggacatgtcaaacagatgttaagcagtgccagagtgacagtagcatcagccgatcttctagttct
tcgtcatcttcttattcctacactagcagttctgggcagagaacagcgcagggggtatcacaaagtagcagaggaggaac
tcttgtcggcgacatcaaacgatcagactgtacaccttgtaatgtgaatggacggacaatacaacctgaaagtacgtttg
agcatcagagcggctgttttaagtacgacaaatgtatctgtaggtgtaacggatactgggactgtccggcagagacagct
cgagacatttgtggacaaggtggtggcggaggagtggttagtgcagagagaagcgattgtagaacatgtaacgtctttgg
gtcaatcaaagtaggagggacacagtttacatacagaaataactgcgaggaatggagaggctgcaggtgcaactgtgatg
gcagttggaattgcgcatcagcagattatagctggtcgtgtgaaaacatttgcaagaaatgctcaataaacgggaccgag
tatgatggtaatactgattttgtttacagggatggatgtataacgtacaatccatgtcgttgtaactgcgatggttcatg
gaactgtccacctgaaagtggtgcttggacttgctcagactcatgtacagagtgcaaagtggacggtaagacttttgctg
gaaacagtaaattccgactgagacgggattgttgggaatgggaccaatgtgattgcaactgtaacggttcctggaattgc
cctaaagaaaatgcgagatgggtttgtcaacagagatgtctgcaatgttctgttgataatcagaaatttgacggaggcaa
gcctttccaactccaacgtggttgttggcaatttaattgtgattgcaattgtgatggcagtttcaattgccccgctgagc
gaacagtggatacctgcagggtaaatatggcgaccggatgtaactactgtagcattaatggcaaaaagtatgacggtaac
acacgtttttcacatacggatggctgtattgaatataaagattgtacctgtaactgtgacggttcttgggaatgtccggg
acgaatggctgtaaacaagtgcgatgtgaatgcaggaactggatgcagatactgcgaggtaaatggagttagatttgaag
gcaattctagattccagcttacaagagactgtttcaaaacggaatgctcttgtcgctgcgatggttcatggcagtgttct
actagatctagctatgtatgtggagacgttaatacacagggcggatgtaaagattgttacgccttgggtaggagaatttc
tagccgcacaagctttgaactctctattggttgcactgagtacaaatgccagtgttcttgtgatggatcttggcaatgtc
cagctggaaatgcctattctaagtgcgatctgtcatctcaatactcttcactattccaacgcttcagtatcaggtcaatt
ggcagcactgcccgctcgttgtgtccgccatgtcatatatctggctctcttttcccagggaactctcagttttcatataa
ggatggatgccacacccattatttgagatgctactgcgacggtggatacagagttgcttcgacagtaatcgaaaattgct
ccgaacaaatattctctggtgccatctcaacttctgagtcgtcttccgttttcctatcagacactgcagaatgtagaaca
tgtacggtcaatgggcaagattatgctccacgatcatccttcaatctccaagtcggatgtcaagtttaccgatgtcagtg
cacatgtaggggtcttccttcatgccaacttggtagagatcagctatgtaacactgttgcttcagagattaccactactg
tcgtaggtggaggtggaagtggagttgtagtaggctcaggtggtagcggtagaacagtcgtttctggagggggaagtaca
cttatcactggaggagggagtcgaaccgtagtctcaggaggaggtagtcgcactttagtatcaggaggaggaagtcgcac
cctagtttcaggaggaggaagtcgtactgtagtttcaggaggaggaagtcgcactgtagtttcagggggagacagtcgta
ctttagtttcaggaggaggcagtcgcactgtagtttcgggaggtgggagtcagggtcgcactatcgttttaggaggggga
ggaggaggtcaaagacgaactgtagtttcaggaggaggtagtcgaactgttgtaagtggaggaagtagacgtgtaacttc
tggaggaggttcaacaggaagaaccgttgttgtagtcagaggaaatcccggaaccgtgactacaggtacaagtacagtag
aacgaagggttgttgtacagccaggaggttcaagcagaactgtcgtaactggaggtaatattggaactggaagcgttata
aggcgggttgtttcaggtggaggtggatcatatgtcgttacaggaggcggatcaagcggaggatcaacaagtgaagtaat
cagacggataattacagatagtaggtatcccactggtggtgtttatcctgaccaaggcggcgttggggttgctcaggatg
gtgcttgcctatactgtgttgttgatggtaaacgacacccaggcggaacttcatttgactacaaacgtggatgtattcgg
tatcgctgtcaatgcaactgtagaggatacgctatgtgtagagcaaccagtctaacagattgctatccgaatgcggaatg
taaacagtgtcaagtggaaggaaagacttaccaagccaattcacggtttacatttgaggaaaattgcaaccgtgtttcct
gcagatgtggttgtgatggctccgctgtatgcgtgagaagccctattcctaactgtcaaaataatctaggatgcagagaa
tgtgtttatgacggggttagaagatcagtctatgaaaagttttatattgaaaatacttgcgaaagaacattatgtcaatg
tgaatgcaatggtcaagtaacttgcagcgctcctgtgaggacatgtgaaaatccagatccgggtacctcatgtatgggat
gcactttaaatggcgtctactatcgaggtggatcatcctttgactttgtccatgggccatggaaatttccctgcacatgc
gactgtaatggtcgctacacttgtgacaggtcacgggctgaataccttgatgacgaatccgatggagaacgttgtaaaac
ttgtgtagttgatggacgatcataccaaggtgattccaaattcactagacagcagcagtgttacgaatatagatgtcagt
gtaactgcgatggaagccatgaatgtgtatctagtggagtttacgtatgcggaagaggacgtggaacgcaaactggatca
cgcacaacaggaacagggcgtggtggaagctctgtcacacgcactaccgtaacagagacccgaacaaacacctcaacctc
ctcgaataccggatcatcgtcttcgaggtctagggtaacgacagcaggaaacaagaattgtcaatactgcaatatttctg
ataagcagtatccacccgatcaacccttcatcatagaacggggctgtaatcgctatagatgtcagtgctattgtaccgga
agatatggctgcagggttggtgaaaaaatatgcgacgatgcagggagaagacttgatcgaggttcaacaacctcgaggac
atcaggttcccgttccaacagtaacagcacgcgtacaagtaccagcagcagaacaagtaccaccagaacaagcaccacaa
gtacatcaacaagaactcaatttacatacgagaccaggcagggaagcatagtctctagtgaacctcttggttcggatggg
tgtcgttcatgtagaaccgatagacaacgctacagatctaattccgacttcgaacttgacgacggttgcaagcgttttag
gtgcagatgtaactgtgatggttcttgggaatgtccaagacagattcctcgaaacatctgttccaacaaccagacccagc
caacctcatccaggacaggttctaattgccaacaatgttcagttcgaggagaaaaattcgagccaaatcaagaattctta
ttgaggtatgattcgtgtagaagtctgcgatgtgactgtgcatgtgatggaacctacacatgtggaagagacattgttaa
cacgtgtgatacaactggtactggtggatgcagaaaatgtgttgttggtgacgaatcatttgctccaaactcacggttta
cctacagagatgacacataccaatataattgtgactgtagttgtgatgggtcttataactgtccagcagaaagaactatt
ccactctcagatgtagctctgatcggaggaataactggaaagtaa

Protein
Protein IDpfu_aug2.0_599.1_30964.t1
Definition-
>pfu_aug2.0_599.1_30964.t1
MAAQARDYSRSYDSRPRPVSKGCKDCNVEGVLFPGGQDFDYRRGCREMTGCTCNCDGSWTCQTDVKQCQSDSSISRSSSS
SSSSYSYTSSSGQRTAQGVSQSSRGGTLVGDIKRSDCTPCNVNGRTIQPESTFEHQSGCFKYDKCICRCNGYWDCPAETA
RDICGQGGGGGVVSAERSDCRTCNVFGSIKVGGTQFTYRNNCEEWRGCRCNCDGSWNCASADYSWSCENICKKCSINGTE
YDGNTDFVYRDGCITYNPCRCNCDGSWNCPPESGAWTCSDSCTECKVDGKTFAGNSKFRLRRDCWEWDQCDCNCNGSWNC
PKENARWVCQQRCLQCSVDNQKFDGGKPFQLQRGCWQFNCDCNCDGSFNCPAERTVDTCRVNMATGCNYCSINGKKYDGN
TRFSHTDGCIEYKDCTCNCDGSWECPGRMAVNKCDVNAGTGCRYCEVNGVRFEGNSRFQLTRDCFKTECSCRCDGSWQCS
TRSSYVCGDVNTQGGCKDCYALGRRISSRTSFELSIGCTEYKCQCSCDGSWQCPAGNAYSKCDLSSQYSSLFQRFSIRSI
GSTARSLCPPCHISGSLFPGNSQFSYKDGCHTHYLRCYCDGGYRVASTVIENCSEQIFSGAISTSESSSVFLSDTAECRT
CTVNGQDYAPRSSFNLQVGCQVYRCQCTCRGLPSCQLGRDQLCNTVASEITTTVVGGGGSGVVVGSGGSGRTVVSGGGST
LITGGGSRTVVSGGGSRTLVSGGGSRTLVSGGGSRTVVSGGGSRTVVSGGDSRTLVSGGGSRTVVSGGGSQGRTIVLGGG
GGGQRRTVVSGGGSRTVVSGGSRRVTSGGGSTGRTVVVVRGNPGTVTTGTSTVERRVVVQPGGSSRTVVTGGNIGTGSVI
RRVVSGGGGSYVVTGGGSSGGSTSEVIRRIITDSRYPTGGVYPDQGGVGVAQDGACLYCVVDGKRHPGGTSFDYKRGCIR
YRCQCNCRGYAMCRATSLTDCYPNAECKQCQVEGKTYQANSRFTFEENCNRVSCRCGCDGSAVCVRSPIPNCQNNLGCRE
CVYDGVRRSVYEKFYIENTCERTLCQCECNGQVTCSAPVRTCENPDPGTSCMGCTLNGVYYRGGSSFDFVHGPWKFPCTC
DCNGRYTCDRSRAEYLDDESDGERCKTCVVDGRSYQGDSKFTRQQQCYEYRCQCNCDGSHECVSSGVYVCGRGRGTQTGS
RTTGTGRGGSSVTRTTVTETRTNTSTSSNTGSSSSRSRVTTAGNKNCQYCNISDKQYPPDQPFIIERGCNRYRCQCYCTG
RYGCRVGEKICDDAGRRLDRGSTTSRTSGSRSNSNSTRTSTSSRTSTTRTSTTSTSTRTQFTYETRQGSIVSSEPLGSDG
CRSCRTDRQRYRSNSDFELDDGCKRFRCRCNCDGSWECPRQIPRNICSNNQTQPTSSRTGSNCQQCSVRGEKFEPNQEFL
LRYDSCRSLRCDCACDGTYTCGRDIVNTCDTTGTGGCRKCVVGDESFAPNSRFTYRDDTYQYNCDCSCDGSYNCPAERTI
PLSDVALIGGITGK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495