Gene
| Gene Model ID | pfu_aug2.0_599.1_30967 |
|---|---|
| Locus | scaffold599.1 : 226173 ... 234904 : - |
| To GenomeBrowser | scaffold599.1:226173..234904 |
| Genes list of scaffold | scaffold599.1 |
| Synonym | pfu_aug1.0_4590.1_30726 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_599.1_30967.t1 | 1 | 1 | ADH_zinc_N | 23 | 74 | 1.4e-13 | 50.4 | 4.0e-17 | 2.0e-13 | 50.0 |
| pfu_aug2.0_599.1_30967.t1 | 1 | 1 | ADH_zinc_N_2 | 55 | 162 | 1.1e-11 | 45.7 | 1.3e-14 | 6.2e-11 | 43.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_599.1_30967.t1 | gi|573874954|ref|XP_006625824.1| | PREDICTED: quinone oxidoreductase PIG3-like [Lepisosteus oculatus] | 2.0e-36 |
| pfu_aug2.0_599.1_30967.t1 | gi|593751757|ref|XP_007114829.1| | PREDICTED: LOW QUALITY PROTEIN: quinone oxidoreductase PIG3 [Physeter catodon] | 1.0e-35 |
| pfu_aug2.0_599.1_30967.t1 | gi|353410913|ref|NP_001085954.2| | tumor protein p53 inducible protein 3 [Xenopus laevis] | 2.0e-35 |
| pfu_aug2.0_599.1_30967.t1 | gi|49256163|gb|AAH73591.1| | MGC82892 protein [Xenopus laevis] | 2.0e-35 |
| pfu_aug2.0_599.1_30967.t1 | gi|291224342|ref|XP_002732164.1| | PREDICTED: quinone oxidoreductase PIG3-like [Saccoglossus kowalevskii] | 3.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_599.1_30967.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_599.1_30967.t1 atgttgtcgtctttatacggcaaagtacaaaacaacgatacggttttggttcatgctggagcaagcggggttggaacagc cgctacacagctttgtggactggtcaatgcaaaagtcattgttactgcaggatcagaggagaaaatcaagctggctaaat cactaggtgcttcacatggcatcaattataaggaagatgacttcagttctaaatgtaccacgtcatcaaaacgcgtcata ctgactgtgctgcatgtgaaaacaagaatggcacaagtgattttgatggcaatagagaaattgtttcaagtcataacact taatcagtacaaggattctcttgtccaagcatttattaaagatgttcttccacattttaagacaaagcgattgaagccca taatcgacacagtcttgcctttggatgaaataaggaaagctcatgagattatggaatctaataagaatgctggcaaaatt gtattaaaagtgagaaattcagagaaacaacaggaggaattataa |
|
Protein
| Protein ID | pfu_aug2.0_599.1_30967.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_599.1_30967.t1 MLSSLYGKVQNNDTVLVHAGASGVGTAATQLCGLVNAKVIVTAGSEEKIKLAKSLGASHGINYKEDDFSSKCTTSSKRVI LTVLHVKTRMAQVILMAIEKLFQVITLNQYKDSLVQAFIKDVLPHFKTKRLKPIIDTVLPLDEIRKAHEIMESNKNAGKI VLKVRNSEKQQEEL |
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