Gene
| Gene Model ID | pfu_aug2.0_5996.1_22733 |
|---|---|
| Locus | scaffold5996.1 : 3056 ... 16536 : + |
| To GenomeBrowser | scaffold5996.1:3056..16536 |
| Genes list of scaffold | scaffold5996.1 |
| Synonym | pfu_aug1.0_9457.1_24561 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5996.1_22733.t1 | 1 | 1 | RVT_1 | 44 | 291 | 2.50006e-41 | 141.3 | 7.00649e-45 | 3.59994e-41 | 140.8 |
| pfu_aug2.0_5996.1_22733.t1 | 1 | 1 | zf-CSL | 470 | 494 | 5.2e-07 | 29.0 | 2.1e-10 | 1.1e-06 | 28.0 |
Transcript
| Transcript ID | pfu_aug2.0_5996.1_22733.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5996.1_22733.t1 atgtcatgtcgcttactgagggagatcgctacagaagctgcgcccatctttcaactcctcttccaagcatccattgacca gggaaaagtgcccactgattggaaaactgccaatgtggttcccatctataagaagggagagaagagtcgagctgaaaatt accgcccagtgagtctaacttcagtcgcctgcaagatacttgaacacataatttgcagcagcattttgcgacacctggac cacaacagcatcctccatgatgcacagcatggttttcgtaaagaacgatcttgcgaaagccaactcatcttgactgtaca tgacctatccagaaacattgacaacaggggccagaccgatcttatcctcctggatttctcgaaggcgtttgacaaagtcc cacataaacgccttctctacaagaccaacttctatggcatccggcacaaccttcaccattggataggagacttccttgga gggcgtacacagaaagtgttactggagggagccacatcgagcaccgcaccagtacagtccggggtgccccaagggagtgt cttaggcccgttgctctttctgatctacattaatgatctaccggagacagtttcagagggatcaacggtgcgcctctttg cagatgactgtgccctttataggaacatcaacaacaaggaagatgccatgatgctccaggaggacctaaacagactgcag aagtgggaggaagcatggctcatggaatttcaccccaagaagtgccaggtgctgaacatcaccaacaagaggaatgtcat tagccatccatacaacatccatggccacacccttgacatagtggattcagcaaaataccttggggtgcatatacataaga gtctgaaatggaaccaccatattgaccatgtgacaaaaaaggcaaacaacaccctggccttcctacgacgcaacctccat cagtgtccgagaaacaccaaagccctctgctacaccaccttggttcgacctctcacagaatacgctagtgtcatctggga tccacacacaataggtaacatacaccggctggagatggttcagcggagagctgcccgagtggtccaccatgactatcgaa caaccagcagtgtctccgccatgctcaaccatctacagtggcaacccctacaggagcgcagagcccatgccaaagccgtg atgatgtactgcatcgtgcaccatctgattcagatcccatctaccaacatacttataccaacgatatcacctaggggaca taatgccaccttcttggtcccctacgcccgtacagtcacctaccagaaatcattcttcctggacagcatccgcatctgga atgcattaacaccagcagcagtcagcgctccaacattagactgcttcaaggaagaactagccagtggagaagacgtcgct aagtgtccgagttgttcgcttatgattaaagttatatatgacattgatgatttcttagaaagtgaagaaatagcagctcc agccaaaacagagctagagaaagcctaa |
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Protein
| Protein ID | pfu_aug2.0_5996.1_22733.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5996.1_22733.t1 MSCRLLREIATEAAPIFQLLFQASIDQGKVPTDWKTANVVPIYKKGEKSRAENYRPVSLTSVACKILEHIICSSILRHLD HNSILHDAQHGFRKERSCESQLILTVHDLSRNIDNRGQTDLILLDFSKAFDKVPHKRLLYKTNFYGIRHNLHHWIGDFLG GRTQKVLLEGATSSTAPVQSGVPQGSVLGPLLFLIYINDLPETVSEGSTVRLFADDCALYRNINNKEDAMMLQEDLNRLQ KWEEAWLMEFHPKKCQVLNITNKRNVISHPYNIHGHTLDIVDSAKYLGVHIHKSLKWNHHIDHVTKKANNTLAFLRRNLH QCPRNTKALCYTTLVRPLTEYASVIWDPHTIGNIHRLEMVQRRAARVVHHDYRTTSSVSAMLNHLQWQPLQERRAHAKAV MMYCIVHHLIQIPSTNILIPTISPRGHNATFLVPYARTVTYQKSFFLDSIRIWNALTPAAVSAPTLDCFKEELASGEDVA KCPSCSLMIKVIYDIDDFLESEEIAAPAKTELEKA |
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