Gene
| Gene Model ID | pfu_aug2.0_6008.1_29481 |
|---|---|
| Locus | scaffold6008.1 : 6846 ... 22654 : + |
| To GenomeBrowser | scaffold6008.1:6846..22654 |
| Genes list of scaffold | scaffold6008.1 |
| Synonym | pfu_aug1.0_3533.1_23350 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_6008.1_29481.t1 | 4 | 1 | Gal_Lectin | 2 | 34 | 1.6e-10 | 41.1 | 0.11 | 790.0 | 0.4 |
| pfu_aug2.0_6008.1_29481.t1 | 4 | 2 | Gal_Lectin | 77 | 97 | 1.6e-10 | 41.1 | 0.14 | 1000.0 | 0.0 |
| pfu_aug2.0_6008.1_29481.t1 | 4 | 3 | Gal_Lectin | 134 | 194 | 1.6e-10 | 41.1 | 2.2e-14 | 1.6e-10 | 41.1 |
| pfu_aug2.0_6008.1_29481.t1 | 4 | 4 | Gal_Lectin | 208 | 227 | 1.6e-10 | 41.1 | 0.14 | 1000.0 | 0.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_6008.1_29481.t1 | gi|268537248|ref|XP_002633760.1| | C. briggsae CBR-GON-1 protein [Caenorhabditis briggsae] | 1.0e-12 |
| pfu_aug2.0_6008.1_29481.t1 | gi|449667877|ref|XP_002162505.2| | 2.0e-12 | |
| pfu_aug2.0_6008.1_29481.t1 | gi|156408774|ref|XP_001642031.1| | predicted protein [Nematostella vectensis] | 2.0e-12 |
| pfu_aug2.0_6008.1_29481.t1 | gi|308481215|ref|XP_003102813.1| | CRE-GON-1 protein [Caenorhabditis remanei] | 4.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_6008.1_29481.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6008.1_29481.t1 atggcaaagtatgccgcagaccaatgcagaaagtgctatggcgacaacgtcagggaaaattctatggcatgcatattaca gtctgtgctctgctggctgaagcgagctcaatataaatcatccgagaagtctgaacaactttcagataggaaggaaatca agaccaagtcttctctgacgagattacaacaaggcccatcatggagtcccgtcgtcatggttgaccattgtgcaactttt ggaaaggcactggtacagaactgtagattggcccagtaccatgcccagtgtttttgtgatgactttaggatcatatcctc gttccccttcgtgtttctatgtgttattgtactcgtcgacgaaaagtctctgattatttgtgagcattacagctatttct taacctgtcctgatgacaagaaacttgaaattgtcactgcttactacggtcgaacggcaccttccagcagaggaacatgt ccaacctcattagacatggacaccaattgcagagctcctacaagctcgagcatcgtccagtctcaatgtgaaggaaaaag tacctgctcactcagagcaactgtggatggtcaatggtcagcatgggtaaacaccggaacgtgttctaaaacatgtggtg gtggaaagcagaaacaggaaagaagttgctctaatccagcaccacgagacggtggcagaggatgtattggagattcatca agatcgatagattgtaattcacagccttgtccag |
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Protein
| Protein ID | pfu_aug2.0_6008.1_29481.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6008.1_29481.t1 MAKYAADQCRKCYGDNVRENSMACILQSVLCWLKRAQYKSSEKSEQLSDRKEIKTKSSLTRLQQGPSWSPVVMVDHCATF GKALVQNCRLAQYHAQCFCDDFRIISSFPFVFLCVIVLVDEKSLIICEHYSYFLTCPDDKKLEIVTAYYGRTAPSSRGTC PTSLDMDTNCRAPTSSSIVQSQCEGKSTCSLRATVDGQWSAWVNTGTCSKTCGGGKQKQERSCSNPAPRDGGRGCIGDSS RSIDCNSQPCP |
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