Gene
| Gene Model ID | pfu_aug2.0_601.1_04385 |
|---|---|
| Locus | scaffold601.1 : 14337 ... 34805 : - |
| To GenomeBrowser | scaffold601.1:14337..34805 |
| Genes list of scaffold | scaffold601.1 |
| Synonym | pfu_aug1.0_4494.1_16418 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_601.1_04385.t2 | 2 | 1 | Glyco_transf_8 | 76 | 197 | 1.8e-11 | 43.8 | 3.1e-15 | 4.6e-11 | 42.5 |
| pfu_aug2.0_601.1_04385.t2 | 2 | 2 | Glyco_transf_8 | 219 | 255 | 1.8e-11 | 43.8 | 0.043 | 640.0 | -0.6 |
Transcript
| Transcript ID | pfu_aug2.0_601.1_04385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_601.1_04385.t1 atgtctccaaaactgaagatggtggtcattgtcatggctgcgttggtggttataggtttttttgctgatcatacaaggat atctaacaagccattagtagcgggtttaattgaaaaaatacaattgatttcttcaaggtcaagcacaccggatataccga ctgttcaagtagctacacaagtctgcagagatcgttatggtgaaatagtaaccatgttgaaatcaatgttactcttaaca aaggctcgcttgatgctatatgtttttgttgatgtcgaaaacaaaaagagaatgaatgaaacgttatggcatcttaggaa aaagtatccggacaaccttactttcaaaataatgtttgtggcatatccgggaatcgatggccaaaatgattttgctgaaa aattcaatccgtgccaaatcactcgagttttctttccgaatttactacctgatgttgattctgttatttacgtggataca gatacgttattttttcgcccgattgaagaactctggtctatgttaaaacaattcaacagatcacaagtgattggcatacc ccccgaagacctaaacaagcatacttggtataattctagaaaacaacatccctattatggctccacggagaagctctact tcatctcttgtgaatggaattaccgaaacgcacattgtcgacatggaaacgtgtgtaaaagagcagcaaaaaatggtatt tctattcttcatggtaatggtcaacagtttataataccagaaaaatcaccagaatttgtagctatcaacaatgctttcct caagtatttatcgagcgaaaaccctaaaacagacattgctgaggctgtgaaaaggaacttagaaaatgtgaagagagtca ccgactgtgtaaaggcattaaggagcttattcagaaaccttacactctcatga |
|
| Transcript ID | pfu_aug2.0_601.1_04385.t2 |
| Definition | - |
>pfu_aug2.0_601.1_04385.t2 atggtgtgtatatccggaatttttatgtctccaaaactgaagatggtggtcattgtcatggctgcgttggtggttatagg tttttttgctgatcatacaaggatatctaacaagccattagtagcgggtttaattgaaaaaatacaattgatttcttcaa ggtcaagcacaccggatataccgactgttcaagtagctacacaagtctgcagagatcgttatggtgaaatagtaaccatg ttgaaatcaatgttactcttaacaaaggctcgcttgatgctatatgtttttgttgatgtcgaaaacaaaaagagaatgaa tgaaacgttatggcatcttaggaaaaagtatccggacaaccttactttcaaaataatgtttgtggcatatccgggaatcg atggccaaaatgattttgctgaaaaattcaatccgtgccaaatcactcgagttttctttccgaatttactacctgatgtt gattctgttatttacgtggatacagatacgttattttttcgcccgattgaagaactctggtctatgttaaaacaattcaa cagatcacaagtgattggcataccccccgaagacctaaacaagcatacttggtataattctagaaaacaacatccctatt atggctccacggagaagctctacttcatctcttgtgaatggaattaccgaaacgcacattgtcgacatggaaacgtgtgt aaaagagcagcaaaaaatggtatttctattcttcatggtaatggtcaacagtttataataccagaaaaatcaccagaatt tgtagctatcaacaatgctttcctcaagtatttatcgagcgaaaaccctaaaacagacattgctgaggctgtgaaaagga acttagaaaatgtgaagagagtcaccgactgtgtaaaggcattaaggagcttattcagaaaccttacactctcatga |
|
Protein
| Protein ID | pfu_aug2.0_601.1_04385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_601.1_04385.t1 MSPKLKMVVIVMAALVVIGFFADHTRISNKPLVAGLIEKIQLISSRSSTPDIPTVQVATQVCRDRYGEIVTMLKSMLLLT KARLMLYVFVDVENKKRMNETLWHLRKKYPDNLTFKIMFVAYPGIDGQNDFAEKFNPCQITRVFFPNLLPDVDSVIYVDT DTLFFRPIEELWSMLKQFNRSQVIGIPPEDLNKHTWYNSRKQHPYYGSTEKLYFISCEWNYRNAHCRHGNVCKRAAKNGI SILHGNGQQFIIPEKSPEFVAINNAFLKYLSSENPKTDIAEAVKRNLENVKRVTDCVKALRSLFRNLTLS |
|
| Protein ID | pfu_aug2.0_601.1_04385.t2 |
| Definition | - |
>pfu_aug2.0_601.1_04385.t2 MVCISGIFMSPKLKMVVIVMAALVVIGFFADHTRISNKPLVAGLIEKIQLISSRSSTPDIPTVQVATQVCRDRYGEIVTM LKSMLLLTKARLMLYVFVDVENKKRMNETLWHLRKKYPDNLTFKIMFVAYPGIDGQNDFAEKFNPCQITRVFFPNLLPDV DSVIYVDTDTLFFRPIEELWSMLKQFNRSQVIGIPPEDLNKHTWYNSRKQHPYYGSTEKLYFISCEWNYRNAHCRHGNVC KRAAKNGISILHGNGQQFIIPEKSPEFVAINNAFLKYLSSENPKTDIAEAVKRNLENVKRVTDCVKALRSLFRNLTLS |
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