Gene
| Gene Model ID | pfu_aug2.0_601.1_04393 |
|---|---|
| Locus | scaffold601.1 : 251714 ... 275349 : - |
| To GenomeBrowser | scaffold601.1:251714..275349 |
| Genes list of scaffold | scaffold601.1 |
| Synonym | pfu_aug1.0_3169.1_30358 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium leak channel non-selective | GO:0005244 GO:0005262 GO:0006816 GO:0016021 GO:0098655 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_601.1_04393.t1 | 3 | 1 | Ion_trans | 158 | 179 | 0.0 | 176.4 | 0.19 | 1400.0 | -1.7 |
| pfu_aug2.0_601.1_04393.t1 | 3 | 2 | Ion_trans | 194 | 425 | 0.0 | 176.4 | 8.5e-32 | 6.3e-28 | 97.3 |
| pfu_aug2.0_601.1_04393.t1 | 3 | 3 | Ion_trans | 516 | 716 | 0.0 | 176.4 | 5.0e-29 | 3.7e-25 | 88.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_601.1_04393.t1 | gi|676439966|ref|XP_009049022.1| | hypothetical protein LOTGIDRAFT_225940 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_601.1_04393.t1 | gi|524871738|ref|XP_005092640.1| | PREDICTED: sodium leak channel non-selective protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_601.1_04393.t1 | gi|383858955|ref|XP_003704964.1| | 0.0 | |
| pfu_aug2.0_601.1_04393.t1 | gi|242007234|ref|XP_002424447.1| | voltage-gated ion channel, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_601.1_04393.t1 | gi|350424274|ref|XP_003493742.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_601.1_04393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_601.1_04393.t1 ggattctgcccagcagaagatgcaggtgtgtggatccagtcagcttgtaccatctggtcctaaatcattactggctcagc agttccagcttagaatggacagaaggagtatgagaggttccaggccaggaagtcttaagactcggacaacagccaaagaa aatggtgacattaacctgagtagtctagtaaataactcggcaaacagggtcagtcataaccgagaatttgacatccgagt ctggcaacaaaagaaacaacaagcagagattaaaaggaatcagttagaagaagacatgagagagaaccaccctttctttg acacgcctcttttcatcgttgggagggagacaaagttccgtaagatatgccaagccattgttaaagccaagtacaactac gtaacaagggacccgataacagggaaagagacctacagcagatgtaaaacattccataagctgctaggattggtttccta cctagattgggctatggttgttgtcaccatcctctcttgcatatccatgatgtttgagaatgcacagaatctgatcatgt ttaatgatccactaaaggtagcagagtatgtgtttgtgctgtgtatgagtgtagagatgggactgaaggtgatggctaac ggattattcttcactcctaaagctgtcgttaaagacttcggtggaggattggatctcttcatttactctaccagtttgat attcctgtgttggatgcctaaggaagtcccccctctatccggagcacagaccctcatgttgttacgatgtcttaggccac ttagaatatttgtcctggttccacatatgaggaaagttgtgtacgaattcttcagagggttcaaagaaatcagtttggta tttatcctgctgatagcgttgatgtttgtgtttgccacgtttggagttcacctactgggaggacgtttggccagatgtaa tgatcctgccattagtgttaaggaaaattgtacaggaatgttctttactagagtgtatgtcacaaagatgaaggtgaaca tggatgttgatgaactaccaggattttatgtcccaagaacttggtccaatcctcacaactttaactttgatagaataagt aatgccatgttagctatgtttgaagtgctgtcattggagggttggttagaggtcagggatgtcatagaaagggttgatcc ggtccatgccttgtatgtacatgtgtttgtgtttattggttacatgatattcctgaccttgtttgtgggcgtggtcattg ccaactacagtgaaaataagggtacagccttgttgaccgttgatcagagaagatggctggatttaaaaggaagaatcaag ctcaatcaaccattacatattccaccaagacctgatggcactgggttcagagcacggatgtacgacattacacaacataa aatgtttaaacgagccgttgtcattctagttcttctaaactgtggtctcctatctgttccgtggaaggagaagaataaag gtgtagcagacatcctggccagtatctccactgtattcacactactcttcctggtagaggttactatgaaagtgatagcg atgtcgccacgtggttactggacaagtagaaggaaccgttttgacatgtttgttaccttccttgggctgatctggattgt ccttaattttactcttggtaatgacactagttactcatttggatttgtagtgattgtactgcgattcttcaccatggctg gaaaacatgccactcttaagatgttaatgttgacagtggtgatgtcagtattaaagagcttcttcatcattatggggatg tttctgttgatgttgttctatgctttctctggagttattctgtttggtacagtaaagcatggatacaatcttggaagaca tgccaattttgagagtgcctccaatgccattgccttgcttttccgtattgtgacaggagaagactggaataaaatcatgc atgattgtatggttatacctccattttgtacactagacaataatttctggcagtcagactgtggcaatgtggagctctca ttggtctacttctgttccttttacttgatcataacgtatattgtgctgaatctacttgttgccatcattatggagaattt ttcactgttttattccaatgaagaagatgcactgctgaactacaatgatatacgacaattccagaatacatggaacatgg tggatataaatagaaagggtgtaatccctgtcaggcgggtaccattcttactgcggctcttacagggtcgtttagaggtg gacctggagaagtaccgtctattgttcaaacatatgtgttatgaaatggagaaactacacggaggtggagatgtatcatt ccatgatgttctacttatgttggcgtaccggtcggttgaggacatatgtaagagcctccagttggaggagttggtagcga ggagggagctggaggagacgatagaggaggaggtagctaagcagaccatcagaaactggctggataaatgtctcaagagg atcagagcgaagtctcccccttcccagaagaaggagcataccaatttgatctccaacctgcgggctactaatgaaccagt tcttttcaccgtcactgaacaaccgtcaagtgcggcagaaagtggtgaggaaaataaacatgatagcccaatgatacgga cgaggaagaagggaatggtagagttacatccccctaacatcctggtacagcctccaccacccatagtacaagtacagtct ccatctcttagaggttcaccaagattagaaaaagagagaccaggactcaagaagaggtccacaagattatccagtgttgg ttccaagaccttgctggttaatctgagccaggcttctgacagtaagtgtgacagtctgatggtgtccccaaccaacacta catttacagagagcattctgattggtgaaaatgtctccacaaacatccaatcatggtggaccggacaaacagacgtgctg ggcacaagaaacggaaactgtgaagaatga |
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Protein
| Protein ID | pfu_aug2.0_601.1_04393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_601.1_04393.t1 DSAQQKMQVCGSSQLVPSGPKSLLAQQFQLRMDRRSMRGSRPGSLKTRTTAKENGDINLSSLVNNSANRVSHNREFDIRV WQQKKQQAEIKRNQLEEDMRENHPFFDTPLFIVGRETKFRKICQAIVKAKYNYVTRDPITGKETYSRCKTFHKLLGLVSY LDWAMVVVTILSCISMMFENAQNLIMFNDPLKVAEYVFVLCMSVEMGLKVMANGLFFTPKAVVKDFGGGLDLFIYSTSLI FLCWMPKEVPPLSGAQTLMLLRCLRPLRIFVLVPHMRKVVYEFFRGFKEISLVFILLIALMFVFATFGVHLLGGRLARCN DPAISVKENCTGMFFTRVYVTKMKVNMDVDELPGFYVPRTWSNPHNFNFDRISNAMLAMFEVLSLEGWLEVRDVIERVDP VHALYVHVFVFIGYMIFLTLFVGVVIANYSENKGTALLTVDQRRWLDLKGRIKLNQPLHIPPRPDGTGFRARMYDITQHK MFKRAVVILVLLNCGLLSVPWKEKNKGVADILASISTVFTLLFLVEVTMKVIAMSPRGYWTSRRNRFDMFVTFLGLIWIV LNFTLGNDTSYSFGFVVIVLRFFTMAGKHATLKMLMLTVVMSVLKSFFIIMGMFLLMLFYAFSGVILFGTVKHGYNLGRH ANFESASNAIALLFRIVTGEDWNKIMHDCMVIPPFCTLDNNFWQSDCGNVELSLVYFCSFYLIITYIVLNLLVAIIMENF SLFYSNEEDALLNYNDIRQFQNTWNMVDINRKGVIPVRRVPFLLRLLQGRLEVDLEKYRLLFKHMCYEMEKLHGGGDVSF HDVLLMLAYRSVEDICKSLQLEELVARRELEETIEEEVAKQTIRNWLDKCLKRIRAKSPPSQKKEHTNLISNLRATNEPV LFTVTEQPSSAAESGEENKHDSPMIRTRKKGMVELHPPNILVQPPPPIVQVQSPSLRGSPRLEKERPGLKKRSTRLSSVG SKTLLVNLSQASDSKCDSLMVSPTNTTFTESILIGENVSTNIQSWWTGQTDVLGTRNGNCEE |
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