Gene
| Gene Model ID | pfu_aug2.0_603.1_10976 |
|---|---|
| Locus | scaffold603.1 : 24905 ... 27065 : - |
| To GenomeBrowser | scaffold603.1:24905..27065 |
| Genes list of scaffold | scaffold603.1 |
| Synonym | pfu_aug1.0_12330.1_61028 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_603.1_10976.t1 | 2 | 1 | AMP-binding | 31 | 109 | 0.0 | 204.2 | 7.3e-20 | 5.4e-16 | 57.9 |
| pfu_aug2.0_603.1_10976.t1 | 2 | 2 | AMP-binding | 240 | 511 | 0.0 | 204.2 | 0.0 | 3.09967e-42 | 144.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_603.1_10976.t1 | gi|156354361|ref|XP_001623364.1| | predicted protein [Nematostella vectensis] | 3.00018e-42 |
| pfu_aug2.0_603.1_10976.t1 | gi|156401023|ref|XP_001639091.1| | predicted protein [Nematostella vectensis] | 9.99995e-41 |
Transcript
| Transcript ID | pfu_aug2.0_603.1_10976.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_603.1_10976.t1 atggaggtatcagaaaagcagcacctgagctatctgtcaaacccaagggaccgtccgtatgtttatgaaactatgattga cgtcctatggagaaggactgagaaatttcccaacaaagaaatcttcgttcaacatgatatcgacggattcagaaaggcta ttacatataaagaactgatgcagcatgtcttgaagttttctaagttcctgataagcaaaggcgttaagaaaggagacttt gttgccctgtttgggccaaactccatagaggttgtcattgcacaatttgccatcatgatggctggtgctgttgctgtcaa cgtagcaatgtcgataaaggatggatcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagacgtactgaatattttcttggaaacagattgtaaagccttcct ttttgatccagggaggaagatggaattgcatgatccaatactccaactcctcaaaaccttaaaagaaaagaatcctaagg taccaccagtttcaaacgatggagacagcgaccccttaatagttttgcttcgtgctatggacggtgcctctaactaccct acacttcagacggcactagaaagtgaggaacctgaggtgaggtttccaactctcttttctgaagatgtcatagctgtgtt cacaacatctggaagtacagggaaaccgaaaatggttcctcacacacatttcagtttcgccaacattccaatacctgacg acttggggttcaaggatagcaccttgtacaatgacagaccgtttgcctggcttggaggatcaccatttacgacaattatg ttgggtgaaacaagaatattcacagacgcctcggttacaatcggtggagaacatactgataagatatggaatatcatcaa aaaagagaagtgtgaaagcgccatacttatgccttatttcattggtgacctacttagtaagaaagatgaatacaaagacc cgttcaaactcaagtttgtactgaccggcggccagatgcttgaaagcttttacacacaagcacttggaatttttgccgaa tcgatggttgttgcgtacgcatctacagaaagtgttactgtttcagtcggaaagctgcttaaagagggtgaccaaatgga atctggttacatcggtacattgggacttggtttagaaatgaagttgatagatgaggatagtcatgtcactgctctcggag aagagggggagatttgcataaggagtccagttctattcaatggatacatcaataatgacgaggcaacaaaggcagttttc cttcctggaaactggttcaggtctggagatcttggcataatcaaagacgatggttcaataataataaaagggagagtaaa aaatatcgtttccagagggacccgtaaaattatgcccgatgcagttgaagatattattttgcaaatgaacggtattctac gcgctgccgttgttgccgttccagacaagaggctttacgaggaagtctgcgcgtgcttcgttgtgaaggaaggattctca atctcggagaaagatgtcgaaacctattgctcggagagaatgttgaagaaacagacattagatggattaggggacattcc tacgtattatcttaaatttgagtctttttctcgcttgctgactggaaagatagacaaaataagcatcaaagaagcagcaa tccaaagactgaatttaaatagctag |
|
Protein
| Protein ID | pfu_aug2.0_603.1_10976.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_603.1_10976.t1 MEVSEKQHLSYLSNPRDRPYVYETMIDVLWRRTEKFPNKEIFVQHDIDGFRKAITYKELMQHVLKFSKFLISKGVKKGDF VALFGPNSIEVVIAQFAIMMAGAVAVNVAMSIKDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXDVLNIFLETDCKAFLFDPGRKMELHDPILQLLKTLKEKNPKVPPVSNDGDSDPLIVLLRAMDGASNYP TLQTALESEEPEVRFPTLFSEDVIAVFTTSGSTGKPKMVPHTHFSFANIPIPDDLGFKDSTLYNDRPFAWLGGSPFTTIM LGETRIFTDASVTIGGEHTDKIWNIIKKEKCESAILMPYFIGDLLSKKDEYKDPFKLKFVLTGGQMLESFYTQALGIFAE SMVVAYASTESVTVSVGKLLKEGDQMESGYIGTLGLGLEMKLIDEDSHVTALGEEGEICIRSPVLFNGYINNDEATKAVF LPGNWFRSGDLGIIKDDGSIIIKGRVKNIVSRGTRKIMPDAVEDIILQMNGILRAAVVAVPDKRLYEEVCACFVVKEGFS ISEKDVETYCSERMLKKQTLDGLGDIPTYYLKFESFSRLLTGKIDKISIKEAAIQRLNLNS |
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