Gene
Gene Model ID | pfu_aug2.0_603.1_10977 |
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Locus | scaffold603.1 : 44617 ... 46815 : - |
To GenomeBrowser | scaffold603.1:44617..46815 |
Genes list of scaffold | scaffold603.1 |
Synonym | pfu_aug1.0_26229.1_55132 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_603.1_10977.t1 | 6 | 1 | zf-B_box | 11 | 21 | 1.2e-10 | 41.0 | 5.2 | 6000.0 | -2.8 |
pfu_aug2.0_603.1_10977.t1 | 1 | 1 | zf-RING_2 | 15 | 59 | 1.3e-07 | 31.3 | 1.1e-10 | 1.3e-07 | 31.3 |
pfu_aug2.0_603.1_10977.t1 | 3 | 1 | zf-RING_5 | 16 | 59 | 3.3e-07 | 29.9 | 2.9e-10 | 3.3e-07 | 29.9 |
pfu_aug2.0_603.1_10977.t1 | 3 | 1 | zf-C3HC4_4 | 16 | 58 | 1.6e-06 | 27.8 | 1.4e-09 | 1.6e-06 | 27.8 |
pfu_aug2.0_603.1_10977.t1 | 3 | 1 | zf-C3HC4 | 16 | 58 | 6.4e-09 | 35.3 | 5.6e-12 | 6.4e-09 | 35.3 |
pfu_aug2.0_603.1_10977.t1 | 4 | 1 | zf-C3HC4_2 | 16 | 58 | 2.8e-07 | 30.4 | 2.4e-10 | 2.8e-07 | 30.4 |
pfu_aug2.0_603.1_10977.t1 | 6 | 2 | zf-B_box | 30 | 43 | 1.2e-10 | 41.0 | 0.13 | 140.0 | 2.4 |
pfu_aug2.0_603.1_10977.t1 | 6 | 3 | zf-B_box | 53 | 60 | 1.2e-10 | 41.0 | 0.9 | 1000.0 | -0.4 |
pfu_aug2.0_603.1_10977.t1 | 6 | 4 | zf-B_box | 94 | 139 | 1.2e-10 | 41.0 | 5.8e-05 | 0.067 | 13.1 |
pfu_aug2.0_603.1_10977.t1 | 4 | 2 | zf-C3HC4_2 | 97 | 128 | 2.8e-07 | 30.4 | 0.0046 | 5.2 | 7.1 |
pfu_aug2.0_603.1_10977.t1 | 3 | 2 | zf-RING_5 | 97 | 129 | 3.3e-07 | 29.9 | 0.0027 | 3.1 | 7.5 |
pfu_aug2.0_603.1_10977.t1 | 3 | 2 | zf-C3HC4 | 99 | 130 | 6.4e-09 | 35.3 | 0.13 | 140.0 | 2.1 |
pfu_aug2.0_603.1_10977.t1 | 3 | 2 | zf-C3HC4_4 | 114 | 130 | 1.6e-06 | 27.8 | 0.15 | 170.0 | 2.2 |
pfu_aug2.0_603.1_10977.t1 | 3 | 3 | zf-RING_5 | 158 | 177 | 3.3e-07 | 29.9 | 2.2 | 2500.0 | -1.8 |
pfu_aug2.0_603.1_10977.t1 | 6 | 5 | zf-B_box | 160 | 197 | 1.2e-10 | 41.0 | 1.1e-13 | 1.2e-10 | 41.0 |
pfu_aug2.0_603.1_10977.t1 | 4 | 3 | zf-C3HC4_2 | 173 | 186 | 2.8e-07 | 30.4 | 8.1 | 9300.0 | -3.3 |
pfu_aug2.0_603.1_10977.t1 | 3 | 3 | zf-C3HC4 | 173 | 186 | 6.4e-09 | 35.3 | 8.4 | 9600.0 | -3.7 |
pfu_aug2.0_603.1_10977.t1 | 3 | 3 | zf-C3HC4_4 | 177 | 186 | 1.6e-06 | 27.8 | 5.1 | 5900.0 | -2.8 |
pfu_aug2.0_603.1_10977.t1 | 4 | 4 | zf-C3HC4_2 | 667 | 673 | 2.8e-07 | 30.4 | 6.0 | 6900.0 | -2.9 |
pfu_aug2.0_603.1_10977.t1 | 6 | 6 | zf-B_box | 668 | 675 | 1.2e-10 | 41.0 | 5.1 | 5800.0 | -2.7 |
Transcript
Transcript ID | pfu_aug2.0_603.1_10977.t1 |
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Definition | - |
>pfu_aug2.0_603.1_10977.t1 atggcagaatcatccttgtcaactcttaccgatgattttctcacttgcaatatttgtctggaaatctaccaggaacctaa gatcttatcctgcctgcattcgttttgccgaacatgtttggaaaaacatctaggtaaaagcaagagcaacaaaaatttga tatgccccctttgccgcgaagtaactcttttgaagcaagagagagtagaagaactgaagaacaatttcttcatccaaaat ctgatagatttcagcttttcaacatcaactcaaatcaaggaaaaacaatgctcgtattgctctcttattgaaaagtccaa tcctgcctttgggaagtgtctcacttgtggcgattttctatgttctgaatgctacagtagacatacacttacaacggaga cctttgaccatgaaatcgcgacgcttgctgacctacaaagcggtagatacaacgagaaactcagatcaagtcaacatatt ccctgtcaggagcacaagaaggaatttcttagatatttctgcgatacatgcgatgttcccgtatgccgagactgcgtgat tcttggtcaccgacagggtcatgatataatagaaccatccaaggcgatcgagaaaaggcgactggagattggttgtttgc tcgaggggttgaacggaaagctagaagaaatcaaagaaagaagtgcgatactgaaggaagaagaaagtagagtggatgta acagaacgtgacatgtcacaattgatacaagatgcaaccgacaggtgggtggaaatgattaaaaatgaagggataaaagc tcaagttctcttggaggcctgcattgaaaaaagaagagaagagctggtagcgactagaagaaaacaagatgaaaagttac ttctcttaaaaaagtcgacggaattttgtcaaaaagtagtcagagatggactagaaggagaaatcatatttcttcagcaa atgatgcgagagcggctttcattcctagagacaagcgtccagtgtacagatgctcttacaccatgggtgccgccaaccat acaaatatcgaaaatgtttgatgaaactcttgtgcatgatttattcaggttcgaagagtcatgttcaccaacaacaaaat catgtgcgaaaggaaatgccgctgttaattatgaacatcaagaaacctacttatcaagttcgatgccgaaatcactggct aaatcttgtccaaaccttgacgatgtagctaacaaggatccaaaattgtcaaaaggaaatgacagatcaaaaggaaagag ggaagatcctaaagataaacaagattctgttggactcattcgaatacgtgatataaattgcgatgctggaggagatgtga acagatcaaaattaacatcggtagcttgggtgaatgaggattcatttgtcgttgtagacgaagccaatgggaaaataaag caatatagcacgaacggcaagctgttacactcagtcaaattgaaagatgtgttaactgtgacatgttccaaaacactcat atactgtggactgagtagcggtcagattaaagttctcaatgcaaaatttgacatccttgatgttaagtctcagaaatacg gaaactgtgttccagttgcgacggggaaattgaaatcacgtgtccttttgctaggtagttcatctatgaatgtcgtaagc aaggaaacagaaatttctagatccatgccttatacagataaaactggcaaacagataaagatgaagccaatgttccccca ttgttgtcgagaggacaaagttgtcgtttcggactggaattctggatcagtatgcgttataaatacagatggaagaatat cagacacatatgaaaaggaaagcagcacttggctaccgggcggactgggatgtgacaacaaaaataatatatttatagct gactattatagtaatgagttaactgtattgaattctaagtgtagatttctgacaaccctcaagatgcccaatgtttataa cccaaggtgcatggcgtgttctgacagcaacaaacttcttataacatttaataatagcgttgccatgttccaaatttcaa aaggaaaaatctaa |
Protein
Protein ID | pfu_aug2.0_603.1_10977.t1 |
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Definition | - |
>pfu_aug2.0_603.1_10977.t1 MAESSLSTLTDDFLTCNICLEIYQEPKILSCLHSFCRTCLEKHLGKSKSNKNLICPLCREVTLLKQERVEELKNNFFIQN LIDFSFSTSTQIKEKQCSYCSLIEKSNPAFGKCLTCGDFLCSECYSRHTLTTETFDHEIATLADLQSGRYNEKLRSSQHI PCQEHKKEFLRYFCDTCDVPVCRDCVILGHRQGHDIIEPSKAIEKRRLEIGCLLEGLNGKLEEIKERSAILKEEESRVDV TERDMSQLIQDATDRWVEMIKNEGIKAQVLLEACIEKRREELVATRRKQDEKLLLLKKSTEFCQKVVRDGLEGEIIFLQQ MMRERLSFLETSVQCTDALTPWVPPTIQISKMFDETLVHDLFRFEESCSPTTKSCAKGNAAVNYEHQETYLSSSMPKSLA KSCPNLDDVANKDPKLSKGNDRSKGKREDPKDKQDSVGLIRIRDINCDAGGDVNRSKLTSVAWVNEDSFVVVDEANGKIK QYSTNGKLLHSVKLKDVLTVTCSKTLIYCGLSSGQIKVLNAKFDILDVKSQKYGNCVPVATGKLKSRVLLLGSSSMNVVS KETEISRSMPYTDKTGKQIKMKPMFPHCCREDKVVVSDWNSGSVCVINTDGRISDTYEKESSTWLPGGLGCDNKNNIFIA DYYSNELTVLNSKCRFLTTLKMPNVYNPRCMACSDSNKLLITFNNSVAMFQISKGKI |