Gene
| Gene Model ID | pfu_aug2.0_6034.1_16168 |
|---|---|
| Locus | scaffold6034.1 : 1 ... 16485 : - |
| To GenomeBrowser | scaffold6034.1:1..16485 |
| Genes list of scaffold | scaffold6034.1 |
| Synonym | pfu_aug1.0_3538.1_52013 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_6034.1_16168.t1 | 3 | 1 | EF-hand_6 | 49 | 60 | 9.5e-08 | 31.3 | 0.68 | 1300.0 | -0.3 |
| pfu_aug2.0_6034.1_16168.t1 | 2 | 1 | EF-hand_8 | 49 | 92 | 1.1e-07 | 31.3 | 1.6e-07 | 0.00029 | 20.3 |
| pfu_aug2.0_6034.1_16168.t1 | 3 | 1 | EF-hand_1 | 50 | 58 | 1.1e-09 | 36.9 | 3.5 | 6600.0 | -3.1 |
| pfu_aug2.0_6034.1_16168.t1 | 2 | 1 | EF-hand_7 | 53 | 91 | 8.8e-07 | 28.9 | 6.4e-06 | 0.012 | 15.7 |
| pfu_aug2.0_6034.1_16168.t1 | 3 | 2 | EF-hand_1 | 67 | 91 | 1.1e-09 | 36.9 | 1.8e-08 | 3.4e-05 | 22.8 |
| pfu_aug2.0_6034.1_16168.t1 | 3 | 2 | EF-hand_6 | 67 | 91 | 9.5e-08 | 31.3 | 1.7e-05 | 0.032 | 14.0 |
| pfu_aug2.0_6034.1_16168.t1 | 2 | 2 | EF-hand_8 | 102 | 126 | 1.1e-07 | 31.3 | 2.5e-05 | 0.046 | 13.3 |
| pfu_aug2.0_6034.1_16168.t1 | 3 | 3 | EF-hand_1 | 105 | 128 | 1.1e-09 | 36.9 | 9.4e-07 | 0.0017 | 17.4 |
| pfu_aug2.0_6034.1_16168.t1 | 3 | 3 | EF-hand_6 | 106 | 128 | 9.5e-08 | 31.3 | 9.9e-06 | 0.018 | 14.8 |
| pfu_aug2.0_6034.1_16168.t1 | 2 | 2 | EF-hand_7 | 106 | 133 | 8.8e-07 | 28.9 | 1.5e-05 | 0.027 | 14.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_6034.1_16168.t1 | gi|632939225|ref|XP_007908279.1| | PREDICTED: dual oxidase 1-like [Callorhinchus milii] | 1.0e-21 |
| pfu_aug2.0_6034.1_16168.t1 | gi|733904183|ref|XP_010715457.1| | PREDICTED: dual oxidase 2 [Meleagris gallopavo] | 4.0e-21 |
| pfu_aug2.0_6034.1_16168.t1 | gi|513200525|ref|XP_425053.4| | PREDICTED: dual oxidase 2 [Gallus gallus] | 8.0e-21 |
| pfu_aug2.0_6034.1_16168.t1 | gi|704172668|ref|XP_010132386.1| | PREDICTED: LOW QUALITY PROTEIN: dual oxidase 2-like, partial [Buceros rhinoceros silvestris] | 1.0e-20 |
| pfu_aug2.0_6034.1_16168.t1 | gi|698431780|ref|XP_009815494.1| | PREDICTED: dual oxidase 2-like, partial [Gavia stellata] | 1.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_6034.1_16168.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6034.1_16168.t1 atgtatgttatcacccgaggggtccgaccgacattcaaagaggacaggtggtcggggccctgtcttgtatttgaaagacc aaggcaaggaaaaggtggaaagaaattgtcaaagagcgcattatcaactattcatcagattaacttgaccaggagagagt ttgctgatatactgggaatgaaatctaactctgaattcatcaataacatgttcctccttgtagacagggatcaaaatggc ttcatcagttttagagagtacctggatttctttgttgtgctagcgaaaggagacgccatggacaaagcggagctcatgtt caaaatgtacgatatcgattacaatggatatttgacaaagatagagttcacgaatatgatcagtgacatccacaacgaaa cttccaattacaataaaaatttcctgcactgtaaggagatcgtaacattgtccgccatgttggaacagcctggaacgtcg gtcctagacgtgacagacgatccgatccgatccgctagaacggtttccaaatggagaagggatcagatgcggaatcagat gtacagatacgaaagaaattatttcggtccttcaggtaataaaaaatatggaagagttccaactctttacgttcttaaaa gaaaaggagctgttaagataagggccgtatttagccctgaatcccgtgacttatttcttccgtatggcgaatcgtacaca gaaaaacatg |
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Protein
| Protein ID | pfu_aug2.0_6034.1_16168.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6034.1_16168.t1 MYVITRGVRPTFKEDRWSGPCLVFERPRQGKGGKKLSKSALSTIHQINLTRREFADILGMKSNSEFINNMFLLVDRDQNG FISFREYLDFFVVLAKGDAMDKAELMFKMYDIDYNGYLTKIEFTNMISDIHNETSNYNKNFLHCKEIVTLSAMLEQPGTS VLDVTDDPIRSARTVSKWRRDQMRNQMYRYERNYFGPSGNKKYGRVPTLYVLKRKGAVKIRAVFSPESRDLFLPYGESYT EKH |
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