Gene
| Gene Model ID | pfu_aug2.0_604.1_14365 |
|---|---|
| Locus | scaffold604.1 : 10326 ... 15083 : + |
| To GenomeBrowser | scaffold604.1:10326..15083 |
| Genes list of scaffold | scaffold604.1 |
| Synonym | pfu_aug1.0_38526.1_26833 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hydroxysteroid dehydrogenase-like protein 2-like | GO:0016491 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_604.1_14365.t1 | 1 | 1 | adh_short | 2 | 175 | 1.7e-19 | 70.3 | 7.2e-23 | 2.1e-19 | 70.0 |
| pfu_aug2.0_604.1_14365.t1 | 1 | 1 | KR | 4 | 119 | 2.4e-06 | 27.3 | 1.2e-09 | 3.7e-06 | 26.7 |
| pfu_aug2.0_604.1_14365.t1 | 1 | 1 | adh_short_C2 | 10 | 185 | 3.8e-11 | 43.2 | 1.6e-14 | 4.7e-11 | 42.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_604.1_14365.t1 | gi|291226055|ref|XP_002733003.1| | PREDICTED: hydroxysteroid dehydrogenase-like protein 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_604.1_14365.t1 | gi|524895469|ref|XP_005104217.1| | PREDICTED: hydroxysteroid dehydrogenase-like protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_604.1_14365.t1 | gi|260819020|ref|XP_002604680.1| | hypothetical protein BRAFLDRAFT_228835 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_604.1_14365.t1 | gi|676482540|ref|XP_009062734.1| | hypothetical protein LOTGIDRAFT_220526 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_604.1_14365.t1 | gi|630022009|ref|XP_007834301.1| | hypothetical protein PFICI_07529 [Pestalotiopsis fici W106-1] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_604.1_14365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14365.t1 atgaagtctgcgctcatcatcggcgcatcacgtggtattggaaggcagatctctcttactctggcagccaatggctatca agtaggcgtggcatcgaagacggagacgtcaacagccgctttgccaggatctatacattccgttgttgaggaaatcaaaa gcagaggaggatcggccattcccatcagatgtgactctagaaatgaggaggatatcagaggggccgttaacgcttgtaca aaacaatttggacagattgatttagcagtgtataacgccggtgccatattgtggaagaaagttattgacacaccccttaa acggtacgatctcatgaattcggtaaacatgagaggttcctacgtcatggtccaagaggtcctaccgaaaatgctggaga gaaaatcggggaaaataatcgtagtatctccaccgatatataacagatttttcaaaggaaagacgccatatgccgtaaca aaagtgggtatgactgttcttgtacatgggctcgccaatgaattaacagatacaggggtatcagtttcggcattgtggcc caccagtgccatcaaaagctttgtgaccgagaaaatgaacacaccagatgaagtcatgtacacgtccgaaatatttgctg atgcagtgctgaaaattgcagaggagccatcccaaaaattgaatggtatggctttacttgacgaggattacctgaggtca gagggagccagtgatttcaccaagtacaggtgtaatcccgcctgtgccccaccaaggatgatgccgaagaaaataccatc cctccttgtggacgaagaactagaaacgactttcccaaaactttga |
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Protein
| Protein ID | pfu_aug2.0_604.1_14365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14365.t1 MKSALIIGASRGIGRQISLTLAANGYQVGVASKTETSTAALPGSIHSVVEEIKSRGGSAIPIRCDSRNEEDIRGAVNACT KQFGQIDLAVYNAGAILWKKVIDTPLKRYDLMNSVNMRGSYVMVQEVLPKMLERKSGKIIVVSPPIYNRFFKGKTPYAVT KVGMTVLVHGLANELTDTGVSVSALWPTSAIKSFVTEKMNTPDEVMYTSEIFADAVLKIAEEPSQKLNGMALLDEDYLRS EGASDFTKYRCNPACAPPRMMPKKIPSLLVDEELETTFPKL |
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