Gene
| Gene Model ID | pfu_aug2.0_604.1_14368 |
|---|---|
| Locus | scaffold604.1 : 57733 ... 64755 : - |
| To GenomeBrowser | scaffold604.1:57733..64755 |
| Genes list of scaffold | scaffold604.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_604.1_14368.t1 | 1 | 1 | Ctf8 | 16 | 117 | 1.4e-24 | 86.2 | 2.4e-28 | 3.5e-24 | 84.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_604.1_14368.t1 | gi|676494131|ref|XP_009066462.1| | hypothetical protein LOTGIDRAFT_155672 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_604.1_14368.t1 | gi|524890460|ref|XP_005101776.1| | PREDICTED: chromosome transmission fidelity protein 8 homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_604.1_14368.t1 | gi|573907015|ref|XP_006641227.1| | PREDICTED: chromosome transmission fidelity protein 8 homolog isoform X1 [Lepisosteus oculatus] | 3.99931e-42 |
| pfu_aug2.0_604.1_14368.t1 | gi|432862429|ref|XP_004069851.1| | PREDICTED: chromosome transmission fidelity protein 8 homolog [Oryzias latipes] | 1.99993e-41 |
| pfu_aug2.0_604.1_14368.t1 | gi|573907017|ref|XP_006641228.1| | PREDICTED: chromosome transmission fidelity protein 8 homolog isoform X2 [Lepisosteus oculatus] | 1.99993e-41 |
Transcript
| Transcript ID | pfu_aug2.0_604.1_14368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14368.t1 atggttcaactctttgtttccttacctgatgatggaggaggtcaccaggagtgggctatgatagaactacagggaagtct agagaccaggcagccagttccactcagtggcaagtttgtaggtgatctgcattttactcaacaaaaggatgtgcccattt tgataattggacatcacattttatatgggaaatgcatggatcttgagaagccttttgctgtgcttgtaaaaaactcatct tcaaacgctgaagaaagtgcaatggacacggacaaaactcccgagaccagctacaaagtgaaggcaattatcaggaaaaa actattgtttaaacaaagaccaaagccaatcatagcaaatgtacccaaaaaattatga |
|
Protein
| Protein ID | pfu_aug2.0_604.1_14368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14368.t1 MVQLFVSLPDDGGGHQEWAMIELQGSLETRQPVPLSGKFVGDLHFTQQKDVPILIIGHHILYGKCMDLEKPFAVLVKNSS SNAEESAMDTDKTPETSYKVKAIIRKKLLFKQRPKPIIANVPKKL |
|