Gene
| Gene Model ID | pfu_aug2.0_604.1_14371 |
|---|---|
| Locus | scaffold604.1 : 79151 ... 90545 : - |
| To GenomeBrowser | scaffold604.1:79151..90545 |
| Genes list of scaffold | scaffold604.1 |
| Synonym | pfu_aug1.0_15746.1_39741 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 10 | GO:0006974 GO:0008234 GO:0044424 GO:0050794 GO:0051603 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_604.1_14371.t1 | 3 | 1 | UCH | 285 | 285 | 8.9e-30 | 103.7 | 0.38 | 1900.0 | -2.3 |
| pfu_aug2.0_604.1_14371.t1 | 3 | 1 | UCH_1 | 362 | 362 | 2.6e-10 | 40.2 | 0.63 | 3100.0 | -2.7 |
| pfu_aug2.0_604.1_14371.t1 | 3 | 2 | UCH | 619 | 633 | 8.9e-30 | 103.7 | 0.00081 | 4.0 | 6.4 |
| pfu_aug2.0_604.1_14371.t1 | 3 | 2 | UCH_1 | 620 | 633 | 2.6e-10 | 40.2 | 0.017 | 83.0 | 2.4 |
| pfu_aug2.0_604.1_14371.t1 | 3 | 3 | UCH_1 | 632 | 839 | 2.6e-10 | 40.2 | 5.4e-14 | 2.6e-10 | 40.2 |
| pfu_aug2.0_604.1_14371.t1 | 3 | 3 | UCH | 634 | 861 | 8.9e-30 | 103.7 | 1.8e-33 | 8.9e-30 | 103.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_604.1_14371.t1 | gi|260805678|ref|XP_002597713.1| | hypothetical protein BRAFLDRAFT_217385 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_604.1_14371.t1 | gi|676450509|ref|XP_009052401.1| | hypothetical protein LOTGIDRAFT_214445 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_604.1_14371.t1 | gi|528486342|ref|XP_005169108.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform X2 [Danio rerio] | 0.0 |
| pfu_aug2.0_604.1_14371.t1 | gi|148225368|ref|NP_001080643.1| | ubiquitin carboxyl-terminal hydrolase 10-B [Xenopus laevis] | 0.0 |
| pfu_aug2.0_604.1_14371.t1 | gi|147902172|ref|NP_001090293.1| | ubiquitin carboxyl-terminal hydrolase 10-A [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_604.1_14371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14371.t1 atgaatatttttcagggtttgagctttggaaactttgaagacttaagttatgaggaattccaaaggatagaagaaatcct ccatggagaaagtaaagtagagtttccatgggattcttcagacacatttacagtgcaagctgactacgttgataaaggat atggagatggaaatagagcagatttcctgccgtatcaaggggacagcagcaacccccagctataccaaggaccagatgga caaagctccatgttaatgcaaactgacaacatttcacatggctcagtgccatctgctcagccaatcacaggaagttttac attgtcaaatgatgatgctagatattttgaccaatcaggtgatggaaatcatagtaactttttctacaatgatcagctaa gatctagagatgaagaatctatgtcgagaggctcgaagccatacgaaagacggaataagaagaaaaggccgccagattac tataaaaaggcagaagaggaaattaaggctgagatacaggcaaaactgaatgaaggacctgaacataatatcggaaattg gcatgaggatcattcaggtgttgtgaatgaatcgtacgaaggtgaaatgtcacaatatattagtggtccaccccagtcat cgtataatccacataatgtgtctaatgttatgcattcccatccccccacatcagaaatgatggacttcggtgttcaccca cccagacaaatgtttccccctgggttgggaattcagcacaacacttcccgtcatgatggaccaaggcaagctagtggtga accctcttatagtgctcaatatcaaaatgttaactctagtattaagaattttccttcacatgcaatgaattcacaaaggg aaattgcacatagtgttcaaagacctgagcaaatcaggagtgacagtagaacagaagtccctaatatgcatggaactcag tatgtgaaagaatgtgtcatcaacgtaaaacaagaactagtctccaacacaagtgctgacgctgctacacaaggtatatc tataagttttgatagccagtctacgttacaaaatgtgccggggcattatacagaacctatcatacatgaaggatctcagg aaacgcaagatcgtgaaatctcaaacaaagtgacacatcagctttcaaaccttcacatatcgcaaacagatagcaaaaat ggtgtaggtgtgaatagttccgaaaaagtaaacgttcctacagaagctttagaaagaaatgattccgccatcacaaacac tctttctatggagataggcactaccgacagtcatgatacgaacgctgcatgtgttagtgatattcccgatactgacgttg acagttcacatccaggacaagatctcgacccagatcagtatccctctctatcaggtgcttccaaaatatcccatccacta ttaccgagccaaacacattctacagctcaaggtgctttatcaaactctagtcagggaacacctgatgaaagtgttgaaaa cagtcattccaacactgcattaccctcaagtgttccagattctaacgccactaaggctccttcaggcagttctgggtctg tttggggagctggtccgtccaaatcttcgtgggctggactattccgtaatgtggacccggccaagcaaggctatgttgtg tccgttaatgaaagtgctagcacagacgctccaaagtcattacccagtaaacctcaggaaactacctacactccagagga actcgtgaaaacagaagatgatcccatagccaaaagtctgggtggaactttgaatgtgtacaaagtgcagcacaaccaaa ttggtctccagccacgaggtcttaacaacagaggaaattggtgctatatcaacgctcttggtaagcaagaagacgcagag gaatttctgagttgtatattggatggtatgcatgaggagatgtctgcactgatcagggcagctcagggaaagtctgatga tatgaaggccaatggttatgttgagggggaggcagaggaaagctcggaagatgtcgacccagattcctgggaacaagtcg gaccaaagaaaaaacatgttcttacaaggaggtcagagaaagtattatcagtgagggatgccttagacggtttggtttcc aaggaaagtgtcagtggatttacctgctcacaaactaaagctgagttggatgtgatgagaagaatgactttggaagagtt acctcccgtgctcattcttcacctgaagttctttgtctacgataaagatggcggaagtcagaaactgatgaagaagattg attacaacatagacctggaagtcactaaagacttgctgtccccaaatgtccgaaacaaacttcagattcatcagaggtcg tacaaattgtttgcagtggtgtatcatcacggtaagaagacgacaggcggccattatactactgccgttttccatcccgc catcaacaactggatcatcatagacgatagtagtgttaaacaagtcaacgtcggacaagtgctaaaatacgtccctcaaa gagtgccgtaccttttgtactatcgcagggtggacatgcactaa |
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Protein
| Protein ID | pfu_aug2.0_604.1_14371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14371.t1 MNIFQGLSFGNFEDLSYEEFQRIEEILHGESKVEFPWDSSDTFTVQADYVDKGYGDGNRADFLPYQGDSSNPQLYQGPDG QSSMLMQTDNISHGSVPSAQPITGSFTLSNDDARYFDQSGDGNHSNFFYNDQLRSRDEESMSRGSKPYERRNKKKRPPDY YKKAEEEIKAEIQAKLNEGPEHNIGNWHEDHSGVVNESYEGEMSQYISGPPQSSYNPHNVSNVMHSHPPTSEMMDFGVHP PRQMFPPGLGIQHNTSRHDGPRQASGEPSYSAQYQNVNSSIKNFPSHAMNSQREIAHSVQRPEQIRSDSRTEVPNMHGTQ YVKECVINVKQELVSNTSADAATQGISISFDSQSTLQNVPGHYTEPIIHEGSQETQDREISNKVTHQLSNLHISQTDSKN GVGVNSSEKVNVPTEALERNDSAITNTLSMEIGTTDSHDTNAACVSDIPDTDVDSSHPGQDLDPDQYPSLSGASKISHPL LPSQTHSTAQGALSNSSQGTPDESVENSHSNTALPSSVPDSNATKAPSGSSGSVWGAGPSKSSWAGLFRNVDPAKQGYVV SVNESASTDAPKSLPSKPQETTYTPEELVKTEDDPIAKSLGGTLNVYKVQHNQIGLQPRGLNNRGNWCYINALGKQEDAE EFLSCILDGMHEEMSALIRAAQGKSDDMKANGYVEGEAEESSEDVDPDSWEQVGPKKKHVLTRRSEKVLSVRDALDGLVS KESVSGFTCSQTKAELDVMRRMTLEELPPVLILHLKFFVYDKDGGSQKLMKKIDYNIDLEVTKDLLSPNVRNKLQIHQRS YKLFAVVYHHGKKTTGGHYTTAVFHPAINNWIIIDDSSVKQVNVGQVLKYVPQRVPYLLYYRRVDMH |
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