Gene
| Gene Model ID | pfu_aug2.0_604.1_14376 |
|---|---|
| Locus | scaffold604.1 : 186830 ... 194559 : - |
| To GenomeBrowser | scaffold604.1:186830..194559 |
| Genes list of scaffold | scaffold604.1 |
| Synonym | pfu_aug1.0_9901.1_53446 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_604.1_14376.t1 | 1 | 1 | zf-U11-48K | 13 | 39 | 6.3e-11 | 41.7 | 7.1e-15 | 1.1e-10 | 41.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_604.1_14376.t1 | gi|676484216|ref|XP_009063275.1| | hypothetical protein LOTGIDRAFT_167528 [Lottia gigantea] | 2.0e-34 |
| pfu_aug2.0_604.1_14376.t1 | gi|260819387|ref|XP_002605018.1| | hypothetical protein BRAFLDRAFT_124130 [Branchiostoma floridae] | 8.0e-16 |
| pfu_aug2.0_604.1_14376.t1 | gi|72159056|ref|XP_791128.1| | PREDICTED: uncharacterized protein LOC586246 isoform X1 [Strongylocentrotus purpuratus] | 3.0e-14 |
| pfu_aug2.0_604.1_14376.t1 | gi|585674569|ref|XP_006818630.1| | PREDICTED: uncharacterized protein LOC102800775 [Saccoglossus kowalevskii] | 3.0e-11 |
| pfu_aug2.0_604.1_14376.t1 | gi|524907974|ref|XP_005109096.1| | PREDICTED: uncharacterized protein LOC101859274 isoform X5 [Aplysia californica] | 5.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_604.1_14376.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14376.t1 atggaagatgtttactttcagaactatgttggtcgtgagtatgctacatgccccttcaatgctcgtcatgagatgcctaa accagagctgcgttatcacatcattaactgcccagacaaagcaatgattgaaccaaatatggcttatgagaaggccaaga gggatggggaggggacaatgtttaagggatgtacagatgtaccagtttatgacaactttgttccccaatgtgatgagaat tgggatgaggaaataccaatagtgccaaggattggagtagatcctgccttttttgcaaagattgaccaaagagttttgac tactgggttgtcgaaggcaaagaaaagggactataacagacagatgttcctaccacctgaggagagaaagttcatcagtg agatagaacagaaggggcccgaggaggaggagccagaagaaggggaggggcagctccgcctacctaagactgcccctcag gtatatataccagccaaaccaaagagcacccaacagccgtctatagtgtttgcacatgctgtgtccatggcaggtgttgg tagaggaataccaggaggagccacaaacttgaacccaccaaatggaatgaacggtgtaagtcagcatcagatggcagctg ttggtagaggaaggggaatcggaagaggggcaccacctggatttaacatagcccctccaggtgggatggtgaatagtacc acaccctatgtccctgaggcttcccgtgcccctgcccctccccagaatgtaatgcccagtgctaacactaatggcctctt caccatggggacagggagaggacgtggcaacctcgtgcaaaccacagcaaataacccacagtttgtgatccctaatgcaa atgtcattacaccaataaatcaacagaatggattcaacaacatagattcaggcacagcagcaagatcagctgtgcaggag gagaagaaactaaggaagaaaatccgacagatagaaatgttagaggagaagtcaaaggaaggatataaactgagtgaaga agaggagttcaaagtagcaaagaaagatgacctgctgcaagctctggaagccttaacaatctga |
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Protein
| Protein ID | pfu_aug2.0_604.1_14376.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14376.t1 MEDVYFQNYVGREYATCPFNARHEMPKPELRYHIINCPDKAMIEPNMAYEKAKRDGEGTMFKGCTDVPVYDNFVPQCDEN WDEEIPIVPRIGVDPAFFAKIDQRVLTTGLSKAKKRDYNRQMFLPPEERKFISEIEQKGPEEEEPEEGEGQLRLPKTAPQ VYIPAKPKSTQQPSIVFAHAVSMAGVGRGIPGGATNLNPPNGMNGVSQHQMAAVGRGRGIGRGAPPGFNIAPPGGMVNST TPYVPEASRAPAPPQNVMPSANTNGLFTMGTGRGRGNLVQTTANNPQFVIPNANVITPINQQNGFNNIDSGTAARSAVQE EKKLRKKIRQIEMLEEKSKEGYKLSEEEEFKVAKKDDLLQALEALTI |
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