Gene
| Gene Model ID | pfu_aug2.0_604.1_14377 |
|---|---|
| Locus | scaffold604.1 : 200240 ... 211337 : + |
| To GenomeBrowser | scaffold604.1:200240..211337 |
| Genes list of scaffold | scaffold604.1 |
| Synonym | pfu_aug1.0_1233.1_00660 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein kinase nek4- partial | GO:0000166 GO:0000278 GO:0004702 GO:0005737 GO:0006468 GO:0006974 GO:0023014 GO:0030145 GO:0035556 GO:0042995 GO:1900062 GO:2000772 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_604.1_14377.t1 | 1 | 1 | Pkinase | 1 | 228 | 0.0 | 202.9 | 0.0 | 0.0 | 202.2 |
| pfu_aug2.0_604.1_14377.t1 | 1 | 1 | Pkinase_Tyr | 8 | 225 | 6.5861e-44 | 149.9 | 0.0 | 9.94922e-44 | 149.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_604.1_14377.t1 | gi|694652408|ref|XP_009482692.1| | PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase Nek4, partial [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_604.1_14377.t1 | gi|470614182|ref|XP_004316604.1| | PREDICTED: serine/threonine-protein kinase Nek4, partial [Tursiops truncatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_604.1_14377.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14377.t1 atgaaagtaatagacctgacgaaatcatcgtcagacgagagggaactggctgccaaggaagctcagctactcgctaaaat caagcataaaaatatactggagcacatcgagtcatttgagaagaatggagcgttgtgtatcgtgacagagttctgtgacc aaggagacttggctcagttcctggaggctagaaatggaaagatcctagaagaagcacgtattgtagaatggtttcaacaa atatgtagtgccctcgagtatatgcattcccaacaaatgctgcatagagacatgaaaacacagaatgtttttcttacggg tcccaatatggttgccaagcttggagatctgggtctagcaaaggtattggagagacctacagccatggcagtaacattct gtggaagtccctattacatgagccctgaaatttttgcctgtaaaccttatgattcaaagagtgacatttgggccatgggt gtatgtgtgtatgagatggctaccttggagagaccctttgatgccacattaatgcagcaactagtatttaaaattgtcca tggccagttacctcccatgccagatgataagtacagtaaagagttgataacaatcatgaagaagatgctgtgtaaggatg ctaacgatcgaccttcagccgcagatattctcaaagatcgtatatttgaaaatcataaatcaccggcagctcctgtgaat ccctcaaagaaaggtgctatgggaatgtcgatacgtggcaaccccgcccttgccgctgctgctgcaggagtacaggaaga taagggacgatttgacatgaaaagtctggtggcaactctaaaccaagtacataagaagaaaagggataaaaagatggaat cggtgagaaaaacggctaatttggattcttcgattatgagtacaacgtacatggacaaagataaaactctaacagacaag ttcagtaaaggactacaaaaatccttccatggaggtaaaaagaaagatgaagatgatgagtatgatttggaggatactgt gaaaggagacgtgtataaacctcccccgatgaacccagcgaagatgatgaacctggttgtaaggaccctaacgaatgtat tccctaacaagcacaaagatgatgaggcagcagggggagacccgggtcttgccttcacaggtgatgagaatgaccctgag gccatgttgttacaccagatagagcaacttcaaagtcactgttgtaagatccttggttaccaactattttcccgagccta tgacatgcttgacgtgacagacgacaatatgatgttagaggaaaaattgataaaactgctgtctccagagaaatttgctg tggttggagtacagctgttttattgtaagaattttgaatacaatctgaataaactgaaggaaggacaaggcacaagtaaa gcatag |
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Protein
| Protein ID | pfu_aug2.0_604.1_14377.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_604.1_14377.t1 MKVIDLTKSSSDERELAAKEAQLLAKIKHKNILEHIESFEKNGALCIVTEFCDQGDLAQFLEARNGKILEEARIVEWFQQ ICSALEYMHSQQMLHRDMKTQNVFLTGPNMVAKLGDLGLAKVLERPTAMAVTFCGSPYYMSPEIFACKPYDSKSDIWAMG VCVYEMATLERPFDATLMQQLVFKIVHGQLPPMPDDKYSKELITIMKKMLCKDANDRPSAADILKDRIFENHKSPAAPVN PSKKGAMGMSIRGNPALAAAAAGVQEDKGRFDMKSLVATLNQVHKKKRDKKMESVRKTANLDSSIMSTTYMDKDKTLTDK FSKGLQKSFHGGKKKDEDDEYDLEDTVKGDVYKPPPMNPAKMMNLVVRTLTNVFPNKHKDDEAAGGDPGLAFTGDENDPE AMLLHQIEQLQSHCCKILGYQLFSRAYDMLDVTDDNMMLEEKLIKLLSPEKFAVVGVQLFYCKNFEYNLNKLKEGQGTSK A |
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