Gene
| Gene Model ID | pfu_aug2.0_6063.1_12845 |
|---|---|
| Locus | scaffold6063.1 : 1 ... 11489 : + |
| To GenomeBrowser | scaffold6063.1:1..11489 |
| Genes list of scaffold | scaffold6063.1 |
| Synonym | pfu_aug1.0_109570.1_49639 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| malate dehydrogenase-like | GO:0008152 GO:0016491 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_6063.1_12845.t1 | 1 | 1 | Ldh_2 | 16 | 279 | 0.0 | 251.2 | 0.0 | 0.0 | 251.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_6063.1_12845.t1 | gi|410908093|ref|XP_003967525.1| | PREDICTED: uncharacterized protein LOC101069440 [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_6063.1_12845.t1 | gi|734608952|ref|XP_010731758.1| | PREDICTED: uncharacterized protein LOC104921026 [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_6063.1_12845.t1 | gi|542223251|ref|XP_005451132.1| | PREDICTED: uncharacterized protein LOC100712095 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_6063.1_12845.t1 | gi|548352023|ref|XP_005728287.1| | PREDICTED: uncharacterized protein LOC102214577 [Pundamilia nyererei] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_6063.1_12845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6063.1_12845.t1 atgtatactacaaagaagtaaagtatggtacttgtaaaggaggaggggtagaaccaaccattgtgaagcagacagctgcc acgggcctggtggaggggcataatttacttggtcccgtggttggtaaatttgctgtagatctagctatagagaaagccaa gaattctggtattggactagttacagccagaggatcgaatcattacggtattgcgggatggtactctttacgagcactca aggagaatcttataggtttatcatttacaaatgcatctccaatactgacaccaaccagatcaaagacgcatgtaattggt tccaacccgatatgttgtgcagctccaggaaaagatggagatagcttcgtattagacatggcaaccacctgtgtagctat gggaaagattgaggttcaaggacggaagaatttacctctacctcatggttgggctgtggacgagagtggaaaggaaacac tgaatccatcagaagttacaggacttcttcccctcggtggtctagaagaaagcagtggatacaaggggtatggattagct ctaatggttgaggttctgtgtggtattctgagcggctcagcgattggtccattcatacggacgtggaaatctttcgacaa ggaggcaaatttaggacactgtttcattgtaattgatccaaagtgttttgaggacgaatttgaagaaagactcagtacac tgatggattactgtagaagtctagatccagttgatccagagaagccggtattgattccaggcgatccagagagaaaccac atagctaaatgtgatagactaggtggaataccttaccatccaaatcaaatcaaatacttgatggacattgccaaagaact tggggttcagccgttcaaagcattataa |
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Protein
| Protein ID | pfu_aug2.0_6063.1_12845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6063.1_12845.t1 VYYKEVKYGTCKGGGVEPTIVKQTAATGLVEGHNLLGPVVGKFAVDLAIEKAKNSGIGLVTARGSNHYGIAGWYSLRALK ENLIGLSFTNASPILTPTRSKTHVIGSNPICCAAPGKDGDSFVLDMATTCVAMGKIEVQGRKNLPLPHGWAVDESGKETL NPSEVTGLLPLGGLEESSGYKGYGLALMVEVLCGILSGSAIGPFIRTWKSFDKEANLGHCFIVIDPKCFEDEFEERLSTL MDYCRSLDPVDPEKPVLIPGDPERNHIAKCDRLGGIPYHPNQIKYLMDIAKELGVQPFKAL |
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