Gene
| Gene Model ID | pfu_aug2.0_607.1_24218 |
|---|---|
| Locus | scaffold607.1 : 103122 ... 132985 : - |
| To GenomeBrowser | scaffold607.1:103122..132985 |
| Genes list of scaffold | scaffold607.1 |
| Synonym | pfu_aug1.0_22.1_14734 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peroxiredoxin-4 isoform x3 | GO:0005515 GO:0005634 GO:0005783 GO:0007252 GO:0007276 GO:0008379 GO:0044707 GO:0044710 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_607.1_24218.t1 | 1 | 1 | AhpC-TSA | 90 | 220 | 4.5e-34 | 116.8 | 1.1e-37 | 8.0e-34 | 115.9 |
| pfu_aug2.0_607.1_24218.t1 | 1 | 1 | Redoxin | 92 | 224 | 2.2e-14 | 53.2 | 5.5e-18 | 4.1e-14 | 52.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_607.1_24218.t1 | gi|671007679|ref|XP_008694706.1| | PREDICTED: peroxiredoxin-4 [Ursus maritimus] | 0.0 |
| pfu_aug2.0_607.1_24218.t1 | gi|359324135|ref|XP_003640290.1| | PREDICTED: peroxiredoxin-4 isoformX1 [Canis lupus familiaris] | 0.0 |
| pfu_aug2.0_607.1_24218.t1 | gi|542194530|ref|XP_005472183.1| | PREDICTED: peroxiredoxin-4-like isoform X2 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_607.1_24218.t1 | gi|348518736|ref|XP_003446887.1| | PREDICTED: peroxiredoxin-4-like isoform X1 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_607.1_24218.t1 | gi|530420948|ref|XP_005274495.1| | PREDICTED: peroxiredoxin-4 isoform X1 [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_607.1_24218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_607.1_24218.t1 atgaataggaagacggatactaggagagtcaagcctccacaacatcgtgaaaagagtgttaacatgcatcagaaaaatac agcgggaaacggcctggatcataaaaatggtcatggtactcaaaagacgaccaagaaaagagaccttagcgggagcacaa tcaaagaaggggatttaaaaagtgtaacgaaacgagtgcaagatatgaatcttcatacagaaaatgatgcggaagaagaa aatgtttctcttgattcccttatggacaaaccagcgccatattttcgcggagaggccattatccatgaagattttgagga tgtttctcttgatcagtatgctggcaaataccttgttcttcttttttatcccatggacttctcttacatatgtccatccg acatcattgccttcagctcaagactagatgactttcaagcgtgtaactgtgagattgtagctgtgtccacggatagcagc cattcacatctacactggactcaaacaccaagaaaacgtggtggagtcggaaaggtgcgatttcctctgctctccgataa aacacaacttatttcgaaaaagtatggtgtttacattaaagaaaaaggctattcaatgagagccacgttcatcatagata caaagggagtcatccgtcacatcatgatatatgggattccgataggaaggtctgtgaatgagacgctgcgtgtggtacgt gcgaatcagtatgttgacgaagaaggcgaagcaggatgtcagtctgagtggcagccaggtagaacaggggttgtattttc cgttgaaggcagtcaacaattcttcaaaactcaacagtga |
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Protein
| Protein ID | pfu_aug2.0_607.1_24218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_607.1_24218.t1 MNRKTDTRRVKPPQHREKSVNMHQKNTAGNGLDHKNGHGTQKTTKKRDLSGSTIKEGDLKSVTKRVQDMNLHTENDAEEE NVSLDSLMDKPAPYFRGEAIIHEDFEDVSLDQYAGKYLVLLFYPMDFSYICPSDIIAFSSRLDDFQACNCEIVAVSTDSS HSHLHWTQTPRKRGGVGKVRFPLLSDKTQLISKKYGVYIKEKGYSMRATFIIDTKGVIRHIMIYGIPIGRSVNETLRVVR ANQYVDEEGEAGCQSEWQPGRTGVVFSVEGSQQFFKTQQ |
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