Gene
| Gene Model ID | pfu_aug2.0_608.1_27582 |
|---|---|
| Locus | scaffold608.1 : 136656 ... 139226 : + |
| To GenomeBrowser | scaffold608.1:136656..139226 |
| Genes list of scaffold | scaffold608.1 |
| Synonym | pfu_aug1.0_141704.1_42727 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_608.1_27582.t1 | 1 | 1 | C1q | 43 | 162 | 2.0e-14 | 53.7 | 5.2e-18 | 2.6e-14 | 53.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_608.1_27582.t1 | gi|426222533|ref|XP_004005445.1| | PREDICTED: complement C1q-like protein 2 isoform X1, partial [Ovis aries] | 5.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_608.1_27582.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_608.1_27582.t1 atgattggaaatattttgaggaaacgtaaatatctgacgataactctaaacccagatgaactggaatatctcgccagttt gaaacatgattgtgccgaggcagatataaaacagaaaccgatctacttcttggcggcactgaaaggcactcaatatacga caaaagctgcaaatgaggtcataaaattccaagatgtcatcgccaatgaaggcggggcttacaactcaaccaatggtcac tttgtggtacctcgtacagggccttacctgatctcctttgggtttttaagtaaccaagctaggggaatccatttccattt agagatacaaggaaaactatctgttctgtcatacacaccaaaagatgaacagtacaatagcgcagagagatgtataccct accctctgaagaaaggggacgtagttcgtgtccgtgtgagcgaggctggtgcgtctatttacggaaaccgttacacgacc ttctctgccatgtatatgaaaggttaa |
|
Protein
| Protein ID | pfu_aug2.0_608.1_27582.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_608.1_27582.t1 MIGNILRKRKYLTITLNPDELEYLASLKHDCAEADIKQKPIYFLAALKGTQYTTKAANEVIKFQDVIANEGGAYNSTNGH FVVPRTGPYLISFGFLSNQARGIHFHLEIQGKLSVLSYTPKDEQYNSAERCIPYPLKKGDVVRVRVSEAGASIYGNRYTT FSAMYMKG |
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