Gene
| Gene Model ID | pfu_aug2.0_608.1_27583 |
|---|---|
| Locus | scaffold608.1 : 152596 ... 173613 : + |
| To GenomeBrowser | scaffold608.1:152596..173613 |
| Genes list of scaffold | scaffold608.1 |
| Synonym | pfu_aug1.0_20399.1_69340 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_608.1_27583.t1 | 2 | 1 | F-box | 625 | 661 | 1.6e-07 | 30.8 | 2.3e-10 | 1.1e-06 | 28.0 |
| pfu_aug2.0_608.1_27583.t1 | 1 | 1 | F-box-like | 627 | 665 | 1.0e-10 | 41.1 | 4.3e-14 | 2.1e-10 | 40.1 |
| pfu_aug2.0_608.1_27583.t1 | 2 | 2 | F-box | 722 | 741 | 1.6e-07 | 30.8 | 0.4 | 2000.0 | -1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_608.1_27583.t1 | gi|676483867|ref|XP_009063163.1| | hypothetical protein LOTGIDRAFT_167437 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_608.1_27583.t1 | gi|746861028|ref|XP_011061383.1| | PREDICTED: uncharacterized protein LOC105150176 [Acromyrmex echinatior] | 1.0e-32 |
| pfu_aug2.0_608.1_27583.t1 | gi|572263525|ref|XP_006609967.1| | PREDICTED: uncharacterized protein LOC102677650 isoform X2 [Apis dorsata] | 1.0e-31 |
| pfu_aug2.0_608.1_27583.t1 | gi|572263523|ref|XP_006609966.1| | PREDICTED: uncharacterized protein LOC102677650 isoform X1 [Apis dorsata] | 1.0e-31 |
| pfu_aug2.0_608.1_27583.t1 | gi|380015244|ref|XP_003691617.1| | PREDICTED: uncharacterized protein LOC100870097 isoform X1 [Apis florea] | 1.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_608.1_27583.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_608.1_27583.t1 atgtcgtctatggaggaagcctctgtggacgaagtagacagcacatcagattcaggggacaagaaaggaagtccaagcaa aatggacgaggaggggaaaacatctgaaaattcagtgaataatcaaaagactgaaaaaacaaacaaggacaaggattctg tttctgatcatgctgatggcaaagattgtcagaaggatacgcctggaaattcagataagaatagtgtagatgagtcatca aaagtttgtgatgatggtgacgatgaaggaaatgacttgacacaatctgataaaggaaaggacaaggagataaagacaga tgaagccatggatacatcagagacagaatgtaaagactcaaaaaaaaacaccaatacggatttgtcttctgatgatgaac atgctttgacaatagacgaggatggaatgaattctactctagattctacggcagatgaaaaggaggatgggattgttgtg aatgaaagtgagattgttaaagcagctgatgtaatggggaagggtaaaaggccacataagaagaaaatagattcagagtt tgaagaatttactgacgacttggagcgcaagttgaagaagaaagtacacatggaaataaggccgggattcggaaagggaa gaacatcaggaaccaagatgatcaataacgtgtctgctttagaatccaaggaaaacacaaaatcacccaaaatccgacag aaatcaatacctccagaagaattagaacagttgaagattccatttaactatggttggagaagggaggttgtaatacgtaa tacacaaaccactacaacaagaggtcaagctgatgtttattaccatcctcctcacggacgcaagttggattgtgtgcagc attcagtgaaccagaagcctgcacccatgttagtgaagccaatattactcccccttgttcctgttgctgtcaatgcggtt cctgtaccgcaagacacggtcaaatctaaaattgcagcaatgttgaagtcagaaacagcaccatcgacatcacaaagtga ttcagtgagaaaaacttcaaaaccaatgcatgtaagcaaggaaactattggacaattaaagagtcttattggaaagacta aattaccaacttcttcaagtctgtcgccaccagttctaatgaattcccaagttacaccctcattttctgtttcaaataca ggcatgaatgttactatcacaccaacatctccagcacttgttgcacctcataatttaccaaaactggatcagatgattag tccagtgacaggtggaggtgaaagtatattaaaaagcaatgtacaaaatacgaaagaaatgaccaaaaaagcaactgaaa ttctgcctccaaaattaacacctgcaccccatgtatcacctgtaaaagtgacgcctccacttcctgtgactaatgtacca acaaatggagtggatatgaataacgcagctaaaaacggacaactccttactctacctgccgctgtggcaaaacggctaaa tctgaatcaaccacttgctcttaaaattaacaacatgcaaattacagtcccctcttcatgtttcttgcatacaaatgaag gactgaaagtgttcttacctccgaagacattccccgtacaaatcggagaaacagcaaaactaagcgtcacagtaacaaat gataaatctgtgtcaaacaacacaagtataagtgtaaagataggtgatgatacttctagtgctaattctgttcaagagaa aacagactctgagaaaaatccttcgacgcatcagatgaaaagacggaccagatgtaccaagtctggtataaatcctgcta actgttacatcagaaggctttatggtggtgctgactgtatgctggaaatattcaattatctcaacatgagtgatttagca agggtggcaatggtgtgtagaacatggaggacattgtccatgcatccttgtctgtggagagaggtgaagtttagaggaat ggaagtacatgactggcaaaaagctagagacttcctactcaaaagggctgtgcaatgtctgaatttcaaaggactttgtc atccgactgcccgtgtgaggacatggcagaaagtggtcactctgatccctaagctgacaagtgtccaggctgtccacttt ggccaagtgccggcctctgctttacattctatatgtgaacgtatgccacacttggaggttttcactgcaaagtggatatc tgactttgatgatgatcgcatgttgaccaagggtacgagtctagacattggtaaattctgttctttgacagaaatgaagg aactacgattacgaggcatatgcaaccttaaactgtcacaattctcactcaatggaggtctggatgaaatagcgtcactt aaacagctcacagtcttgtctttaaccacactagaagatgtaccagagaaaagtttctcctttctgtctaagatgtctca gctggaagtccttgaacttggttattgttctaattggacagctatgtccccagcatgtacgaattccacaacacttgaca tcatctcaaagttgaagaaattaagccatttagagtggggaataatcggcggtgatgtgaaatctgactttacagaggaa agggacaagtcaaaattagaccaggagtgggtgccgcttttacaaagtgatgcttttgatccaagcactgacaaatctgt ggaatatatccaagtttttaagttgacagcagatctgagtgagaaactgcctgatacctacatcaaagtctgtaggtctc aacctatcacccctcaagacataatggaatcatcagaggatgcaagttcaaggtga |
|
Protein
| Protein ID | pfu_aug2.0_608.1_27583.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_608.1_27583.t1 MSSMEEASVDEVDSTSDSGDKKGSPSKMDEEGKTSENSVNNQKTEKTNKDKDSVSDHADGKDCQKDTPGNSDKNSVDESS KVCDDGDDEGNDLTQSDKGKDKEIKTDEAMDTSETECKDSKKNTNTDLSSDDEHALTIDEDGMNSTLDSTADEKEDGIVV NESEIVKAADVMGKGKRPHKKKIDSEFEEFTDDLERKLKKKVHMEIRPGFGKGRTSGTKMINNVSALESKENTKSPKIRQ KSIPPEELEQLKIPFNYGWRREVVIRNTQTTTTRGQADVYYHPPHGRKLDCVQHSVNQKPAPMLVKPILLPLVPVAVNAV PVPQDTVKSKIAAMLKSETAPSTSQSDSVRKTSKPMHVSKETIGQLKSLIGKTKLPTSSSLSPPVLMNSQVTPSFSVSNT GMNVTITPTSPALVAPHNLPKLDQMISPVTGGGESILKSNVQNTKEMTKKATEILPPKLTPAPHVSPVKVTPPLPVTNVP TNGVDMNNAAKNGQLLTLPAAVAKRLNLNQPLALKINNMQITVPSSCFLHTNEGLKVFLPPKTFPVQIGETAKLSVTVTN DKSVSNNTSISVKIGDDTSSANSVQEKTDSEKNPSTHQMKRRTRCTKSGINPANCYIRRLYGGADCMLEIFNYLNMSDLA RVAMVCRTWRTLSMHPCLWREVKFRGMEVHDWQKARDFLLKRAVQCLNFKGLCHPTARVRTWQKVVTLIPKLTSVQAVHF GQVPASALHSICERMPHLEVFTAKWISDFDDDRMLTKGTSLDIGKFCSLTEMKELRLRGICNLKLSQFSLNGGLDEIASL KQLTVLSLTTLEDVPEKSFSFLSKMSQLEVLELGYCSNWTAMSPACTNSTTLDIISKLKKLSHLEWGIIGGDVKSDFTEE RDKSKLDQEWVPLLQSDAFDPSTDKSVEYIQVFKLTADLSEKLPDTYIKVCRSQPITPQDIMESSEDASSR |
|