Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_608.1_27586
Locus scaffold608.1 : 198043 ... 209544 : -
To GenomeBrowser scaffold608.1:198043..209544
Genes list of scaffold scaffold608.1
Synonym pfu_aug1.0_143035.1_57230

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_608.1_27586.t1 2 1 DUF4611 7 84 1.7e-09 37.7 9.1e-11 5.6e-08 32.8
pfu_aug2.0_608.1_27586.t1 2 2 DUF4611 82 111 1.7e-09 37.7 0.00039 0.24 11.5

Transcript
Transcript IDpfu_aug2.0_608.1_27586.t1
Definition-
>pfu_aug2.0_608.1_27586.t1
atgcttaaaatacaaatacatgataaaaatggcacgaagaatgaaataataaagcaatgtggccattctgatggcgaagt
gaatttgagaaaactccacgagtcgtgtatcgaaatgcagtcagaggttaattcggtcctcagtgcacatgtcgaaaaag
agagatcacaaggcatcacaaatacagctgctaatgaagaagaagatgaagaagatgaaagtgaagatgatgacatggac
acaaacacaaaagatgatgaagaagatgaaagtgaagatgatgacatagacacaaacacaagtaatggaccagcagaaaa
gaaattaaaaacataa

Protein
Protein IDpfu_aug2.0_608.1_27586.t1
Definition-
>pfu_aug2.0_608.1_27586.t1
MLKIQIHDKNGTKNEIIKQCGHSDGEVNLRKLHESCIEMQSEVNSVLSAHVEKERSQGITNTAANEEEDEEDESEDDDMD
TNTKDDEEDESEDDDIDTNTSNGPAEKKLKT

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