Gene
| Gene Model ID | pfu_aug2.0_609.1_30975 |
|---|---|
| Locus | scaffold609.1 : 110860 ... 112495 : - |
| To GenomeBrowser | scaffold609.1:110860..112495 |
| Genes list of scaffold | scaffold609.1 |
| Synonym | pfu_aug1.0_17256.1_69057 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_609.1_30975.t1 | 1 | 1 | DnaJ | 4 | 65 | 1.8e-29 | 101.2 | 9.6e-33 | 3.6e-29 | 100.2 |
| pfu_aug2.0_609.1_30975.t1 | 3 | 1 | CTDII | 212 | 235 | 2.6e-26 | 91.3 | 0.0036 | 13.0 | 5.7 |
| pfu_aug2.0_609.1_30975.t1 | 3 | 2 | CTDII | 293 | 316 | 2.6e-26 | 91.3 | 0.0035 | 13.0 | 5.7 |
| pfu_aug2.0_609.1_30975.t1 | 3 | 3 | CTDII | 345 | 424 | 2.6e-26 | 91.3 | 3.7e-26 | 1.4e-22 | 79.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_609.1_30975.t1 | gi|524914370|ref|XP_005112000.1| | PREDICTED: dnaJ homolog subfamily B member 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_609.1_30975.t1 | gi|676482258|ref|XP_009062640.1| | hypothetical protein LOTGIDRAFT_128634 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_609.1_30975.t1 | gi|504139407|ref|XP_004582155.1| | PREDICTED: dnaJ homolog subfamily B member 4 [Ochotona princeps] | 0.0 |
| pfu_aug2.0_609.1_30975.t1 | gi|21313156|ref|NP_080202.1| | dnaJ homolog subfamily B member 4 [Mus musculus] | 0.0 |
| pfu_aug2.0_609.1_30975.t1 | gi|170579335|ref|XP_001894786.1| | DnaJ homolog subfamily B member 4 [Brugia malayi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_609.1_30975.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_609.1_30975.t1 atgggcaaggattattacaagatccttggaatttcaaaaggcgccagtgacgatgaaatcaagaaagggtatcgaaaaat ggctttgaaatatcacccggataaaaacaagtcccccggtgctgaagaaaaatttaaagaaattgcagaagcctacgacg tattgagtgacaagaacaagcgtgaaatttacgataagtatggtgaggagggtctgaaaaatggcccctccccaggaggc ggtggagggccaagtgggggaacgtatcattacgagtttcatggagaccccagagatacatttagaatgttttttggcaa tgacgatcctttcgctagttttttcggaggtggtggcggctttggtggcccaggtgtaggtggttcaaggcatgtgttca caaactttgggggtccaggagaagaacatatggatgttgatgatgatccgttcggtggatttggaggtggcggacatgga atgggtggaggaatgccacggagaaaacgtcaggattctgctgtagtgcgagaactgccagtatctttagaagacattta caaaggtacaacgaaaaaactgaaaatcacccgtagagtgctcaatcctgatggaaaatctacaagaaacgaagagaaaa tactgacaattgatgtgaaacctggttggaaagccggaacaaagataacattcccaaaagagggagaccaaagtcctcat agtataccagnaggaatgccacggagaaaacgtcaggattctgctgtagtgcgagaactgccagtatctttagaagacat ttacaaaggtacaacgaaaaaactgaaaatcacccgtagagtgctcaatccagatggaaaatctacaagaaacgaagaga aaatactgacaattgatgtgaaacctggttggaaagccggaacaaagataacattcccaaaagagggagaccaaagtcct catagtataccagccgatgtaatatttgtgatcaaagacaaacctcatccaaaattcaaaagagatggaagtgacataaa attcaaagcaagaatatcactgaaagaggccttatgtggatgtacacttcagataccaacaatagatgggagaactattc cactaaaactcagggaagttgtgaaaccaggtgtgaataagagagttcaaggagagggactacctgtgcccaaacaacct ggaaaacgtggtgacctcatcatagaatttgacattgtattcccaaatcatatttcgaacactgcaaaggaaatattaca agactgtctaccttcatcatag |
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Protein
| Protein ID | pfu_aug2.0_609.1_30975.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_609.1_30975.t1 MGKDYYKILGISKGASDDEIKKGYRKMALKYHPDKNKSPGAEEKFKEIAEAYDVLSDKNKREIYDKYGEEGLKNGPSPGG GGGPSGGTYHYEFHGDPRDTFRMFFGNDDPFASFFGGGGGFGGPGVGGSRHVFTNFGGPGEEHMDVDDDPFGGFGGGGHG MGGGMPRRKRQDSAVVRELPVSLEDIYKGTTKKLKITRRVLNPDGKSTRNEEKILTIDVKPGWKAGTKITFPKEGDQSPH SIPXGMPRRKRQDSAVVRELPVSLEDIYKGTTKKLKITRRVLNPDGKSTRNEEKILTIDVKPGWKAGTKITFPKEGDQSP HSIPADVIFVIKDKPHPKFKRDGSDIKFKARISLKEALCGCTLQIPTIDGRTIPLKLREVVKPGVNKRVQGEGLPVPKQP GKRGDLIIEFDIVFPNHISNTAKEILQDCLPSS |
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