Gene
| Gene Model ID | pfu_aug2.0_609.1_30978 |
|---|---|
| Locus | scaffold609.1 : 200237 ... 206909 : - |
| To GenomeBrowser | scaffold609.1:200237..206909 |
| Genes list of scaffold | scaffold609.1 |
| Synonym | pfu_aug1.0_20851.1_25896 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_609.1_30978.t1 | 1 | 1 | CR6_interact | 69 | 225 | 2.8e-26 | 92.1 | 2.3e-30 | 3.4e-26 | 91.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_609.1_30978.t1 | gi|684388582|ref|XP_009169110.1| | hypothetical protein T265_05766 [Opisthorchis viverrini] | 2.0e-16 |
| pfu_aug2.0_609.1_30978.t1 | gi|675853418|ref|XP_009012269.1| | hypothetical protein HELRODRAFT_184006 [Helobdella robusta] | 8.0e-16 |
| pfu_aug2.0_609.1_30978.t1 | gi|688541858|ref|XP_001345133.4| | PREDICTED: growth arrest and DNA damage-inducible proteins-interacting protein 1 [Danio rerio] | 2.0e-15 |
| pfu_aug2.0_609.1_30978.t1 | gi|28277882|gb|AAH45944.1| | LOC402803 protein, partial [Danio rerio] | 3.0e-15 |
| pfu_aug2.0_609.1_30978.t1 | gi|742114317|ref|XP_010873254.1| | PREDICTED: growth arrest and DNA damage-inducible proteins-interacting protein 1 [Esox lucius] | 2.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_609.1_30978.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_609.1_30978.t1 atggcggcggccatcagactacaaaacggaataattttaaagaatatttgtaaagatttttgtggaatccagtaccaggt cgtacgtaataaatctagcttgaaaaaagatcccacccgagagctcaaagatgtatgtcgattaccttaccatctcagac gtcgaatgaaacatcgaccggagtttgtgccgaatatcaacaaccttgacacaagttttattaccgaaaaacataaaata aaaggttttagaagagggcttttcggtaaatatggcttcaagtcgggtattgaaccctcagaaatctggccatcggagag ggaagttcaagcatatgactcggaagatagacactggtttgaaccaccattaaaagaaatgatttctacacataaagagg aaatacagatgaaagagaaagctatttcagaaaaaatgaagagggtagagaagaacatggaattaatgccaggtctgata gaaaagttcagattaaaacaaaagaaagcaagcgatgatagagacatttcaaagaaaaaggtattggaagatgctcaaga agcaagggaacatttcggctttgacatagcaaaacatgatccaaggtttaaaaaatggatggaagagaaaaaactgaaga aaaaagaagagagaaagcaaaagaagagagatgcacagttcttattaccgaacaagaatttatga |
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Protein
| Protein ID | pfu_aug2.0_609.1_30978.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_609.1_30978.t1 MAAAIRLQNGIILKNICKDFCGIQYQVVRNKSSLKKDPTRELKDVCRLPYHLRRRMKHRPEFVPNINNLDTSFITEKHKI KGFRRGLFGKYGFKSGIEPSEIWPSEREVQAYDSEDRHWFEPPLKEMISTHKEEIQMKEKAISEKMKRVEKNMELMPGLI EKFRLKQKKASDDRDISKKKVLEDAQEAREHFGFDIAKHDPRFKKWMEEKKLKKKEERKQKKRDAQFLLPNKNL |
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