Gene
| Gene Model ID | pfu_aug2.0_609.1_30979 |
|---|---|
| Locus | scaffold609.1 : 228390 ... 247669 : + |
| To GenomeBrowser | scaffold609.1:228390..247669 |
| Genes list of scaffold | scaffold609.1 |
| Synonym | pfu_aug1.0_9719.1_24622 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_609.1_30979.t1 | 1 | 1 | THAP | 4 | 94 | 2.5e-06 | 27.5 | 1.5e-09 | 7.4e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_609.1_30979.t1 | gi|221102397|ref|XP_002168958.1| | 2.0e-21 | |
| pfu_aug2.0_609.1_30979.t1 | gi|449673403|ref|XP_004207948.1| | PREDICTED: uncharacterized protein LOC101240057 [Hydra vulgaris] | 1.0e-20 |
| pfu_aug2.0_609.1_30979.t1 | gi|617302306|ref|XP_007546267.1| | PREDICTED: uncharacterized protein LOC103134100 [Poecilia formosa] | 2.0e-18 |
| pfu_aug2.0_609.1_30979.t1 | gi|658911450|ref|XP_008395789.1| | PREDICTED: uncharacterized protein LOC103457440 isoform X2 [Poecilia reticulata] | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_609.1_30979.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_609.1_30979.t1 atggttaatttctgtgcaattgttggatgcggaaatcgtggggacagagataaaaagtctttctttcgtttacctgccgt tttaactcgtggatgcgataaaaccaaggaactgtcaaaggaaaggcgagctaaatggctggcgattatacatgtatcgc gagaaataaagacgtccaacttgccatacatccgtgtatgctctgatcatttcatcaaaggaaagccatccgctttgttc gactctgctaatccagattgggcacccactttgaaactcggacacaccaaggatttccacaaatatccctaccgggtttg gggaatccagatgcatggaacacaggaaagtcaatcaagcacaaacaataccttggacatccagcaaaggtcaaggccac agaaatgctcagatgaaaacgtggatgttgcaagagaaagaaggaccaaaacaaaaggatatgattttgaaaatgatgac aacaacctaaacaccatcatgcctctaaacccagccaaatctgatgtagatcaactgaaaacaaaacattacagaggtga tggaaattatggtgatgacgaaatggacacaaacatgttgacttcaaaggcacaaaagcatgggcttgaatgttctgatg attcagacaggaatgatggaataaagagaccaaggagaataattaaatctcatgatgacactaggatgtcaaatttgaag cagaaagacatttcagaatcgcataccagtacatatgcagataaaacttgtcatacaggagtcagtaaaaatagacagac aaaggatgaaactggtgttttgagccacacttcgtggagtaaagaaaaggatcacaaatcttcagccccgctgtctgaca ttccctctgtctgtctactatgtgggaagaaatctgtgaataaaagcctgatttcaagtgatatagggatacacacagca gcgtatgatctcataacaaagtattttggttgtgaactggactttgatctaggaacttcattatgtaccaggtgtgaaca gatccttgaactgtttgacgaggcaaaatcacagatggatgatttagaggagcagctatggcggagaatgaaacatacag caaaaggtggacttgatcgacaccagaagcttcatcccaagtatatgtataatggacttaggctggaagatctgaagaag tcagggatagagggttattctgtgttttggaataaatttgatccagcacaggttgtttacaatggaacttctgtggctga gcagtttctttccgagtccaaggatcagttaatcaaatttgtagtattctgccaatcaaaaaaatgtcagcgtcagattg ttcaaccagtgggagtagttataaacgaccaaaatattcaacagccctcaaactccacacagaattccaagattgcattg cccatcttacaaaaaggaccatttgttaaaagttctagtcagttggtggatcaacaagtacaaaagccgtctctccaatc tggtcagtgtcacaatccatcccaacaaaacattctatcatcagtgtctgtaagtggtggatccagcagagcaaatgtac aaaactcgggtacagctcaacagagtggtacaaactcaagtcaaatacagaatactccaccatccccagtccaagtacag aacattcagccagctctacttcaaacacagtttgttcaaccatctccagtgcaaacacaatatgttcagtcagccccagt tcaaacacagtatattcaaactctcccagttcaaacacagtattttcaacctgtaccaatacaaatacagaatgttccct catgtgcagtgcaaataccaaatcttcaatcaggcaatctgcagatacagaatgttcaaaatgctcctgtgcaagtacag agtcaacaaggcattatgcaaataccaaatgtacagtcacagtatgtacagaatgtacaaacagttccatatcaaattca gaatgttcaaccaggcgtaatgcaaatacaaaatatcccatcaggcacagtacaaatacagaatgtacaacaaagcacaa tgccggcacagaatgttcaaccttacccagtaaaaataaagaaagttcagaggatggaagaaaatagtgatatggaagtg aaaactgatggcgaaaatcatgataatttgaaagaagaggttgaaattagaaatacttcatcatctgagattctgtgtaa agtaaaggaggaactaccagatccagacgaggagggttttcaacagttagatttagatgtacaggtcaaagtagaagatg attcaatgtttgtagtacctctgaacaatccttag |
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Protein
| Protein ID | pfu_aug2.0_609.1_30979.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_609.1_30979.t1 MVNFCAIVGCGNRGDRDKKSFFRLPAVLTRGCDKTKELSKERRAKWLAIIHVSREIKTSNLPYIRVCSDHFIKGKPSALF DSANPDWAPTLKLGHTKDFHKYPYRVWGIQMHGTQESQSSTNNTLDIQQRSRPQKCSDENVDVARERRTKTKGYDFENDD NNLNTIMPLNPAKSDVDQLKTKHYRGDGNYGDDEMDTNMLTSKAQKHGLECSDDSDRNDGIKRPRRIIKSHDDTRMSNLK QKDISESHTSTYADKTCHTGVSKNRQTKDETGVLSHTSWSKEKDHKSSAPLSDIPSVCLLCGKKSVNKSLISSDIGIHTA AYDLITKYFGCELDFDLGTSLCTRCEQILELFDEAKSQMDDLEEQLWRRMKHTAKGGLDRHQKLHPKYMYNGLRLEDLKK SGIEGYSVFWNKFDPAQVVYNGTSVAEQFLSESKDQLIKFVVFCQSKKCQRQIVQPVGVVINDQNIQQPSNSTQNSKIAL PILQKGPFVKSSSQLVDQQVQKPSLQSGQCHNPSQQNILSSVSVSGGSSRANVQNSGTAQQSGTNSSQIQNTPPSPVQVQ NIQPALLQTQFVQPSPVQTQYVQSAPVQTQYIQTLPVQTQYFQPVPIQIQNVPSCAVQIPNLQSGNLQIQNVQNAPVQVQ SQQGIMQIPNVQSQYVQNVQTVPYQIQNVQPGVMQIQNIPSGTVQIQNVQQSTMPAQNVQPYPVKIKKVQRMEENSDMEV KTDGENHDNLKEEVEIRNTSSSEILCKVKEELPDPDEEGFQQLDLDVQVKVEDDSMFVVPLNNP |
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