Gene
| Gene Model ID | pfu_aug2.0_61.1_03528 |
|---|---|
| Locus | scaffold61.1 : 36666 ... 46729 : + |
| To GenomeBrowser | scaffold61.1:36666..46729 |
| Genes list of scaffold | scaffold61.1 |
| Synonym | pfu_aug1.0_19125.1_69241 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_61.1_03528.t1 | 2 | 1 | MIF4G | 1 | 80 | 3.7e-34 | 117.9 | 5.3e-27 | 1.1e-23 | 83.7 |
| pfu_aug2.0_61.1_03528.t1 | 2 | 2 | MIF4G | 114 | 156 | 3.7e-34 | 117.9 | 2.7e-13 | 5.6e-10 | 38.9 |
| pfu_aug2.0_61.1_03528.t1 | 2 | 1 | MA3 | 439 | 549 | 2.5e-23 | 81.9 | 4.1e-26 | 8.8e-23 | 80.1 |
| pfu_aug2.0_61.1_03528.t1 | 2 | 2 | MA3 | 642 | 678 | 2.5e-23 | 81.9 | 2.4 | 5100.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_61.1_03528.t1 | gi|676472298|ref|XP_009059447.1| | hypothetical protein LOTGIDRAFT_124155, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_61.1_03528.t1 | gi|260841383|ref|XP_002613895.1| | hypothetical protein BRAFLDRAFT_277494 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_61.1_03528.t1 | gi|683909368|ref|XP_009087328.1| | PREDICTED: eukaryotic translation initiation factor 4 gamma 1 [Serinus canaria] | 0.0 |
| pfu_aug2.0_61.1_03528.t1 | gi|701341380|ref|XP_009981772.1| | PREDICTED: eukaryotic translation initiation factor 4 gamma 1 [Tauraco erythrolophus] | 0.0 |
| pfu_aug2.0_61.1_03528.t1 | gi|675607077|ref|XP_008947413.1| | PREDICTED: eukaryotic translation initiation factor 4 gamma 1 [Merops nubicus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_61.1_03528.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03528.t1 atgttaacagagaatattatgcatgactgtttgttcaaactgttacgggcgaaggatgaggagagtttagaatgtttgtg ccgacttctgttcactatcggcaaggagttagataccgacaaggccaagcctaggatggatcagtactttaaccagatgg aaaagatagtatcagagaagaagacttcatccagagttagatttatgttacaagatgtgatagagctgaggctgaataaa tggattccccgacgtgacgaaaacaaccccaagacgctggaccagatccataaagaggctcagagagaggaacaagaaag acaaatcttcttacagcaagctcaacaacaacaaaaacctaggatggatcagtactttaaccagatggagaagatagtat cagagaagaagacttcatccagagttagatttatgttacaagatgtgatagagctgaggctgaataaatggattccccga cgtgacgaaaacaaccccaagactctggaccagatccataaagaggctcagagagaggaacaagaaagacaaatcttctt acagcaagctcaacaacaacaaaaagtacagggtggatccaggggcggtggcccgaggggttccagaggaggtcctgcta tgtcaggatctattggctccagtgaaggatggaatacagtgggtaaagctaacattcgtgctgataggcagtctattgat ccatccaaacttaagttgtctagggtaagttataatggttccagaggaggtcctgctatgtcaggatctattggctccag tgaaggatggaatacagtgggtaaagctaacattcgtgctgataggcagtctattgatccatccaaacttaagttgtcta ggcaaaatgtagatgagtcaagtattcagcttggacctgggggaggggcgagtaggtttgctggttggggacgtggaagt acgggaggtggtgcccgcaactcacaggaggaaagcaaaactccaagtaacaggttttctgccctcagtaagaatgagga tgagaacaggagtagatttggtgtcagtccggcacgaggcgactccagggggaggggcttcggtaaacctcccggcagtc ggggtatcactcctagatcctccattgaacaggaacgggagaaagctctggctgctgtcagggatattgccacaggtcag ggtgcaccaaggcagggattgagtagagatagtagtagagaatcacggagacccgaacgggaaccagagaaagtggcgcc tcctgctgtcaaacagcttaccacagacgaaatggagaagaaaacaaagtccatcatggatgagtatcttcatttacagg atgttaaggaggcagtgttatgtgtagaggagttaaactcccccagtacaatccatgtgttcgttagtacagcattaaac cacgtgctggagaggtcagaggtcgcccgcagtcaaactggccatctattacacgatctagtcaaaaaaggaactatatc tgtagatgtctatattaaagggttacacgagattctcctgtacgcagaggatatggaaattgacattccaaaaatctggc agtattttggtgagctgatcggtcctatgattcaggatggaagtgtaccgcttaacttcctacgccaggcggcagaacca ctcaaagaaaataacaaggctggtaaccttgtagctgaggtcctccatgcagcaagtcatagagagggccacaagaaagt gagtacattgtggagacagtcaagtttacactgggacgagtttgtacctgctgatcaaatacaagctttccttaaagata agaaattagagttcacagagggagacggaagtcatccatccacgcccactatttcacggtctatagaatccatacaggaa aaactagacgatatgatgggcaaacagaatgccgacaatgaaggcgtcttcgactggatagaggaaaattgtgatgacaa gacgatgaaaagtaaaaagtttatacgtgccttgatgacgagtgtctgccaaagtgcaataactgagaatgttaatctac ataggggtgatgttgagttttatactacccatattcacagcggatgtgaattcagttacctggatttttcactctaccct tacatgtga |
|
Protein
| Protein ID | pfu_aug2.0_61.1_03528.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03528.t1 MLTENIMHDCLFKLLRAKDEESLECLCRLLFTIGKELDTDKAKPRMDQYFNQMEKIVSEKKTSSRVRFMLQDVIELRLNK WIPRRDENNPKTLDQIHKEAQREEQERQIFLQQAQQQQKPRMDQYFNQMEKIVSEKKTSSRVRFMLQDVIELRLNKWIPR RDENNPKTLDQIHKEAQREEQERQIFLQQAQQQQKVQGGSRGGGPRGSRGGPAMSGSIGSSEGWNTVGKANIRADRQSID PSKLKLSRVSYNGSRGGPAMSGSIGSSEGWNTVGKANIRADRQSIDPSKLKLSRQNVDESSIQLGPGGGASRFAGWGRGS TGGGARNSQEESKTPSNRFSALSKNEDENRSRFGVSPARGDSRGRGFGKPPGSRGITPRSSIEQEREKALAAVRDIATGQ GAPRQGLSRDSSRESRRPEREPEKVAPPAVKQLTTDEMEKKTKSIMDEYLHLQDVKEAVLCVEELNSPSTIHVFVSTALN HVLERSEVARSQTGHLLHDLVKKGTISVDVYIKGLHEILLYAEDMEIDIPKIWQYFGELIGPMIQDGSVPLNFLRQAAEP LKENNKAGNLVAEVLHAASHREGHKKVSTLWRQSSLHWDEFVPADQIQAFLKDKKLEFTEGDGSHPSTPTISRSIESIQE KLDDMMGKQNADNEGVFDWIEENCDDKTMKSKKFIRALMTSVCQSAITENVNLHRGDVEFYTTHIHSGCEFSYLDFSLYP YM |
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