Gene
| Gene Model ID | pfu_aug2.0_61.1_03532 |
|---|---|
| Locus | scaffold61.1 : 211425 ... 228963 : + |
| To GenomeBrowser | scaffold61.1:211425..228963 |
| Genes list of scaffold | scaffold61.1 |
| Synonym | pfu_aug1.0_1327.1_36955 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_61.1_03532.t1 | 1 | 1 | 7tm_1 | 108 | 304 | 1.6e-32 | 112.6 | 2.4e-36 | 1.8e-32 | 112.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_61.1_03532.t1 | gi|676440462|ref|XP_009049184.1| | hypothetical protein LOTGIDRAFT_173452 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_61.1_03532.t1 | gi|700391515|ref|XP_009936130.1| | PREDICTED: opsin-5 [Opisthocomus hoazin] | 6.0e-34 |
| pfu_aug2.0_61.1_03532.t1 | gi|543354846|ref|XP_005521877.1| | PREDICTED: opsin-5-like [Pseudopodoces humilis] | 6.0e-34 |
| pfu_aug2.0_61.1_03532.t1 | gi|675423306|ref|XP_008925292.1| | PREDICTED: opsin-5 [Manacus vitellinus] | 9.0e-34 |
| pfu_aug2.0_61.1_03532.t1 | gi|697835095|ref|XP_009637903.1| | PREDICTED: LOW QUALITY PROTEIN: opsin-5 [Egretta garzetta] | 1.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_61.1_03532.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03532.t1 atgaagccagtcgtcgttttcttatcgctgatctctctgagctcgggtctcagatcttattacctggcaccatctgtctc atacacgaaacctctgttatacggaagtggcatgaatggcggcggtggcaccggaagtactcttggaggtggtggaggca gcatgcaggcactttatggatatcctgctatggcagcagcagcaacaaataatactacggaatcagatgaattttatttg gacaaaactgagaagctttctgatctttcataccgtgtgttaggatcgtacctggcagttgtcggattccttgccgtggt aggtaacatctgcctgatagccttctttgccaccaaatctaacagaaagagtcccatatacctcttcattataaacatag ctactgccgacattatagagtccatactcggttaccctcttgctgtgtattccaacttcaacagcagatggatgtttgga ccgatcggctgtgacctgtacgcctttacctgctttacggccactctttctaacatgatgacgtatgtcgccatcagcgt gtatcgcttcttgaccatctgccatagaaacgatgcaggaatttatgtccagaggacgagcacggtgagttggatcattt gtgctatctgggtttactcactactctgggctacgatcccattcatgggctggggctcgtatgggctggagaagttcaag acctcttgttcagtagcatggactgaaacgtcaagtgatggaaaatcgttcgtcttatctctgttcgtctttgttctctt cgtgccagtttgctctatgggatatatgtacctcaaattgatcaagtccataaaggggaaaatctcatccatccctgaac aaagtacctcgacagaagatacaatgaatatcaagtgtggtctccatggagtccaggtggtacatgacatagatagtcga gttatcaagaaaacggaggctcaaacgtatcaatcagccataaatttgcagcatggaccagacatgcacgtttcaaccaa aattgatcgaactttgcaaagtttgtcctcggggattcctggtccaccagcagtgaaactcaccaagtgcactcacaata gagcaccaagaagcaaatggtttggttatccggattacgtgcgcataccctcccacttttccggttatccagagggtctc gaagaacgcataattgagtgtaaaattatatcctcaaagttggatgacaactcaaacaagaccgcaaaatgcaggggcca aagcaacatagatgaatatataaatggaaatacaaaaggaaaggccctacgatatacagtccgtgctcggcaggctgtag cgagctcatgcatgttatcacatgtgaagtccgatcgacattcaggtcggggccctgttttcacgaagaagtttggacag gacctggcatggactcccgacgtcatagtcagtcagagagcaattcttaagaattcaccggtacaaggctgtagattggt caagtccattgccgagtgtccgtctgatgacattaggatcatatccactgtatag |
|
Protein
| Protein ID | pfu_aug2.0_61.1_03532.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03532.t1 MKPVVVFLSLISLSSGLRSYYLAPSVSYTKPLLYGSGMNGGGGTGSTLGGGGGSMQALYGYPAMAAAATNNTTESDEFYL DKTEKLSDLSYRVLGSYLAVVGFLAVVGNICLIAFFATKSNRKSPIYLFIINIATADIIESILGYPLAVYSNFNSRWMFG PIGCDLYAFTCFTATLSNMMTYVAISVYRFLTICHRNDAGIYVQRTSTVSWIICAIWVYSLLWATIPFMGWGSYGLEKFK TSCSVAWTETSSDGKSFVLSLFVFVLFVPVCSMGYMYLKLIKSIKGKISSIPEQSTSTEDTMNIKCGLHGVQVVHDIDSR VIKKTEAQTYQSAINLQHGPDMHVSTKIDRTLQSLSSGIPGPPAVKLTKCTHNRAPRSKWFGYPDYVRIPSHFSGYPEGL EERIIECKIISSKLDDNSNKTAKCRGQSNIDEYINGNTKGKALRYTVRARQAVASSCMLSHVKSDRHSGRGPVFTKKFGQ DLAWTPDVIVSQRAILKNSPVQGCRLVKSIAECPSDDIRIISTV |
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