Gene
| Gene Model ID | pfu_aug2.0_61.1_03536 |
|---|---|
| Locus | scaffold61.1 : 280561 ... 296384 : - |
| To GenomeBrowser | scaffold61.1:280561..296384 |
| Genes list of scaffold | scaffold61.1 |
| Synonym | pfu_aug1.0_5425.1_45214 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| denticleless protein homolog | GO:0006974 GO:0043231 GO:0043232 GO:0044238 GO:0044260 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_61.1_03536.t1 | 5 | 1 | WD40 | 92 | 127 | 7.2e-27 | 92.2 | 2.5e-09 | 3.7e-05 | 23.4 |
| pfu_aug2.0_61.1_03536.t1 | 5 | 2 | WD40 | 133 | 170 | 7.2e-27 | 92.2 | 1.1e-11 | 1.6e-07 | 30.9 |
| pfu_aug2.0_61.1_03536.t1 | 5 | 3 | WD40 | 231 | 251 | 7.2e-27 | 92.2 | 0.01 | 150.0 | 2.4 |
| pfu_aug2.0_61.1_03536.t1 | 5 | 4 | WD40 | 282 | 300 | 7.2e-27 | 92.2 | 0.00022 | 3.3 | 7.7 |
| pfu_aug2.0_61.1_03536.t1 | 5 | 5 | WD40 | 313 | 346 | 7.2e-27 | 92.2 | 1.1e-10 | 1.7e-06 | 27.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_61.1_03536.t1 | gi|524873380|ref|XP_005093437.1| | PREDICTED: denticleless protein homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_61.1_03536.t1 | gi|524873384|ref|XP_005093439.1| | PREDICTED: denticleless protein homolog isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_61.1_03536.t1 | gi|556998595|ref|XP_006002475.1| | PREDICTED: denticleless protein homolog [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_61.1_03536.t1 | gi|543359371|ref|XP_005523485.1| | PREDICTED: denticleless protein homolog [Pseudopodoces humilis] | 0.0 |
| pfu_aug2.0_61.1_03536.t1 | gi|699648443|ref|XP_009895836.1| | PREDICTED: denticleless protein homolog, partial [Picoides pubescens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_61.1_03536.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03536.t1 atgtcagggttgttgaaaagcattttcttaagggaaatatgcacaaagaaccgatatgggacattgaaagctgacctagg agttgtattggaggattttgaaagtttggccacagataaatatgtcactgtcactgatgatgacgggacaatggtaccac ctcttgcatgtgaattctgtaaagtatattccaggagttatattttatgtgttgttgatgaaaaaggagatgctatgtta tatgacacaaggaagactggccagtatgctctgctgaaagtatggcagacccacaccaatgccgtctttgacacagactg gataccgggagaggataaaatactgactgcctctggagatcagactgttgcattatgggacgtatcaacaggacaaagaa ttaacgtttttaggggccacacaagctcagttaggactgttaatgtacagagagatcattctgctgtgtttgccacaggg tctcgtgatggacatataatggtctgggatacaagatgtaccaaaaaggatggatacatacagccagttaacaccattag gaatgtacataccctcccacagtctggtgtgaaagcaaaaagaaagtacaaacttccacctgctagggatagtcagatga gtgtaatagatgtaaaattccagacagacatgcatctatggtcagcaggtgcagtggatggcctagcttttgactcctct cacagtcagctgtttgccagttgtacagatgacatcatatatcagtttgatgctgcaggacttaatcacaaaccagctta ctgctataaaggccataagaacagtacattttacatcaaggcgagtgtaagtcctgatgaccaattcctgattactggat ctacagacgaaatggcatatatctatcaaatagggaagtcaaatttgagtcctgttgtccttaaaggtcatactcaagaa gtctcagctgtcagatggtcacctgtagaaatgaataagatcgtgacattgtcagatgattgtatgatgaggatatggcg ccttcacagacggcagtctccggcaggtccagaggaggtgacgggaactgcagagaggacacatagggaaataggtataa cggcagaagagaggcctgtagaaacggagaacattgacccaaacataccacaagctcccagcaaattgcacacgacaatc agtgcaaagtcaccaaaacctgtgtctccctctatcaagagctggctcaagaaaaacatcacaccagggggcgctgctga tgcggctgggacgtcttctttgtcacttaagaagaatgccaagatttcaatatttggaaatgaaaaacttccgtgtaaac gaaaactagtggatgatgaggatgaatcagataaagtagaagtcaatccagcaaagcgcagacatatcaataatagtcct atcaagtcctacagttctagtcccaagaaatttgaaagtccgagaaaagcacaaagccccagaaaacttgaaatcaaatg tagtccccacaaagctatgctcagtccagaactacagggcagggtcctcaggaatatcggtccaagtttagcctccagac tcaacagtccagagaaattagattctgactgtaaggatatacatgtaaatacattaaggaaactaagcagttttgtgcca caatctccaactgtgaacttgccaaacttggtgctagaaggtagtgtgaataaagtcaatttacataatcgaacagagga aaaagaaaactgtgcaataaaacaaggtaaaaaagactggctaacaaagttacggttagaaaagtacggattgaatgtag atgagagctcaacagaaaatgtatcgcctaaattatctgttagtgaaagtacatcacccaaactatctcaatccagcctt agctcgggggattcaccacggagtcataaactttcacagagtagtcaaagctcacaggatccggtcagtaatagcggaga taataaagccaaactatccaagacaccatctaagggaatgaggtcattgctccactacttcaaagctaggtga |
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Protein
| Protein ID | pfu_aug2.0_61.1_03536.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03536.t1 MSGLLKSIFLREICTKNRYGTLKADLGVVLEDFESLATDKYVTVTDDDGTMVPPLACEFCKVYSRSYILCVVDEKGDAML YDTRKTGQYALLKVWQTHTNAVFDTDWIPGEDKILTASGDQTVALWDVSTGQRINVFRGHTSSVRTVNVQRDHSAVFATG SRDGHIMVWDTRCTKKDGYIQPVNTIRNVHTLPQSGVKAKRKYKLPPARDSQMSVIDVKFQTDMHLWSAGAVDGLAFDSS HSQLFASCTDDIIYQFDAAGLNHKPAYCYKGHKNSTFYIKASVSPDDQFLITGSTDEMAYIYQIGKSNLSPVVLKGHTQE VSAVRWSPVEMNKIVTLSDDCMMRIWRLHRRQSPAGPEEVTGTAERTHREIGITAEERPVETENIDPNIPQAPSKLHTTI SAKSPKPVSPSIKSWLKKNITPGGAADAAGTSSLSLKKNAKISIFGNEKLPCKRKLVDDEDESDKVEVNPAKRRHINNSP IKSYSSSPKKFESPRKAQSPRKLEIKCSPHKAMLSPELQGRVLRNIGPSLASRLNSPEKLDSDCKDIHVNTLRKLSSFVP QSPTVNLPNLVLEGSVNKVNLHNRTEEKENCAIKQGKKDWLTKLRLEKYGLNVDESSTENVSPKLSVSESTSPKLSQSSL SSGDSPRSHKLSQSSQSSQDPVSNSGDNKAKLSKTPSKGMRSLLHYFKAR |
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