Gene
| Gene Model ID | pfu_aug2.0_61.1_03540 |
|---|---|
| Locus | scaffold61.1 : 397209 ... 422806 : + |
| To GenomeBrowser | scaffold61.1:397209..422806 |
| Genes list of scaffold | scaffold61.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_61.1_03540.t1 | 4 | 1 | zf-Di19 | 29 | 61 | 8.1e-06 | 25.8 | 0.002 | 2.3 | 8.4 |
| pfu_aug2.0_61.1_03540.t1 | 5 | 1 | zf-H2C2_2 | 31 | 47 | 2.5e-10 | 40.1 | 0.00015 | 0.17 | 12.2 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 1 | zf-C2H2_4 | 38 | 61 | 3.2e-12 | 45.8 | 7.5e-06 | 0.0085 | 16.3 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 1 | zf-C2H2_jaz | 38 | 58 | 3.6e-07 | 30.1 | 0.019 | 21.0 | 5.4 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 1 | zf-C2H2 | 38 | 61 | 4.6e-15 | 54.9 | 2.0e-05 | 0.023 | 15.0 |
| pfu_aug2.0_61.1_03540.t1 | 5 | 2 | zf-H2C2_2 | 52 | 77 | 2.5e-10 | 40.1 | 7.7e-10 | 8.7e-07 | 28.9 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 2 | zf-C2H2_4 | 67 | 90 | 3.2e-12 | 45.8 | 0.00029 | 0.33 | 11.3 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 2 | zf-C2H2_jaz | 67 | 88 | 3.6e-07 | 30.1 | 0.047 | 54.0 | 4.1 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 2 | zf-Di19 | 67 | 93 | 8.1e-06 | 25.8 | 0.0005 | 0.58 | 10.3 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 2 | zf-C2H2 | 67 | 90 | 4.6e-15 | 54.9 | 1.0e-06 | 0.0012 | 19.0 |
| pfu_aug2.0_61.1_03540.t1 | 5 | 3 | zf-H2C2_2 | 131 | 143 | 2.5e-10 | 40.1 | 0.062 | 71.0 | 3.9 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 3 | zf-Di19 | 131 | 152 | 8.1e-06 | 25.8 | 0.003 | 3.4 | 7.8 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 3 | zf-C2H2_4 | 132 | 154 | 3.2e-12 | 45.8 | 8.0e-05 | 0.091 | 13.1 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 3 | zf-C2H2_jaz | 132 | 152 | 3.6e-07 | 30.1 | 2.6e-05 | 0.03 | 14.4 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 3 | zf-C2H2 | 132 | 154 | 4.6e-15 | 54.9 | 7.3e-06 | 0.0083 | 16.4 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 4 | zf-Di19 | 154 | 179 | 8.1e-06 | 25.8 | 0.0022 | 2.5 | 8.2 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 4 | zf-C2H2_4 | 155 | 178 | 3.2e-12 | 45.8 | 6.5e-06 | 0.0074 | 16.5 |
| pfu_aug2.0_61.1_03540.t1 | 5 | 4 | zf-H2C2_2 | 155 | 166 | 2.5e-10 | 40.1 | 0.0064 | 7.3 | 7.0 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 4 | zf-C2H2_jaz | 155 | 174 | 3.6e-07 | 30.1 | 6.9e-05 | 0.079 | 13.1 |
| pfu_aug2.0_61.1_03540.t1 | 4 | 4 | zf-C2H2 | 155 | 178 | 4.6e-15 | 54.9 | 1.3e-06 | 0.0015 | 18.7 |
| pfu_aug2.0_61.1_03540.t1 | 5 | 5 | zf-H2C2_2 | 169 | 178 | 2.5e-10 | 40.1 | 1.3 | 1500.0 | -0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_61.1_03540.t1 | gi|697823355|ref|XP_009632137.1| | PREDICTED: uncharacterized protein LOC104121796, partial [Egretta garzetta] | 5.0e-17 |
| pfu_aug2.0_61.1_03540.t1 | gi|514755574|ref|XP_005021867.1| | PREDICTED: zinc finger protein 112-like, partial [Anas platyrhynchos] | 9.0e-16 |
| pfu_aug2.0_61.1_03540.t1 | gi|347963085|ref|XP_566366.4| | AGAP000062-PA [Anopheles gambiae str. PEST] | 9.0e-16 |
| pfu_aug2.0_61.1_03540.t1 | gi|530654516|ref|XP_005313405.1| | PREDICTED: zinc finger protein 2-like [Chrysemys picta bellii] | 1.0e-15 |
| pfu_aug2.0_61.1_03540.t1 | gi|591348454|ref|XP_007052782.1| | PREDICTED: zinc finger and SCAN domain-containing protein 2-like [Chelonia mydas] | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_61.1_03540.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03540.t1 atgagacagaaaaagaggcccgtagaattgccgagggtgcagcatgtcagactaccattcatcgtgcccgaaacgggaga cgacgagatgcatcatggggagtatcgaccttacaaatgtcacatgtgcgtgaaaagattctggggaaatgacagtttag agcagcatattaaacgagtacactccagggaaaagccgtatgagtgtgctcactgtgataaaaagtattctgtgtgttat gacctccagaaacatgtacgtagtgtgcatggcaaagatattaactggtctaattccattccatccaagactgctgatca agaaccaaaaaatgcctccggccacaagtgcaaagttaccggcatcaaaacgcaggcgcttgaccaactgaactttaagt gtaaattttgtggacgaggatttgcgacaacaaatggacttggtgtacatttaaaaatgcactttaggtgcaaggtatgt tttaaaggattcaatacggaggaatcgctacgaattcatctgcagaaagcccacgatattgtcggagatcaagagtatgt tctatag |
|
Protein
| Protein ID | pfu_aug2.0_61.1_03540.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03540.t1 MRQKKRPVELPRVQHVRLPFIVPETGDDEMHHGEYRPYKCHMCVKRFWGNDSLEQHIKRVHSREKPYECAHCDKKYSVCY DLQKHVRSVHGKDINWSNSIPSKTADQEPKNASGHKCKVTGIKTQALDQLNFKCKFCGRGFATTNGLGVHLKMHFRCKVC FKGFNTEESLRIHLQKAHDIVGDQEYVL |
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