Gene
| Gene Model ID | pfu_aug2.0_61.1_03542 |
|---|---|
| Locus | scaffold61.1 : 431289 ... 438678 : - |
| To GenomeBrowser | scaffold61.1:431289..438678 |
| Genes list of scaffold | scaffold61.1 |
| Synonym | pfu_aug1.0_42001.1_48474 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| aldose 1-epimerase | GO:0005975 GO:0016853 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_61.1_03542.t1 | 2 | 1 | Aldose_epim | 73 | 166 | 9.5e-30 | 103.7 | 6.1e-28 | 9.0e-24 | 84.1 |
| pfu_aug2.0_61.1_03542.t1 | 2 | 2 | Aldose_epim | 173 | 242 | 9.5e-30 | 103.7 | 1.2e-07 | 0.0018 | 17.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_61.1_03542.t1 | gi|21220860|ref|NP_626639.1| | 3.0e-27 | |
| pfu_aug2.0_61.1_03542.t1 | gi|28869825|ref|NP_792444.1| | 2.0e-26 | |
| pfu_aug2.0_61.1_03542.t1 | gi|66045605|ref|YP_235446.1| | 5.0e-26 | |
| pfu_aug2.0_61.1_03542.t1 | gi|29348938|ref|NP_812441.1| | 8.0e-26 | |
| pfu_aug2.0_61.1_03542.t1 | gi|504105249|ref|WP_014339235.1| | aldose 1-epimerase [Pseudomonas fluorescens] | 9.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_61.1_03542.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03542.t1 atggacagcacaacgtcagcagcaacaaccacagaagcgacaacgacggaggcgacaacaacgacggaggcaacgacaac cacaactgagacaacaacccaaacaacaactactatcccggcaacaacagaaacgacaacaccaggaactccgcctccca tggctaaaatgatggagagtgagttatttggcacggtggatggggaagacatatacaaatatacacttaaaaacattcac gacgttgaaatatcggtgataaattacggaggaataattaccaacatcctggttcctgatcgcgatggcaacctagctga cgtcactctaggatttgataacttggatgagtacacagtaaatccatcttacttcggtgccatcgtcgggagatatgcaa acagagtggccaatggtcagttcattatagatggcgccacatacaacatacccaaaattcaacactgggtgaacagcctt catggaggtacaaaaggatttgacaagggttctggcacaatatttgatcaccaggtaaacatctttgctgaaaaatacac tcctgttcatccagatggccacttgatacctaaaggtgtcattcagctggtggacggtaaggcgtacgacctacgggaga agaaaactctaggagacgtgataccgtcagctcctggtgggttaggcttcgacatcaactacagcttcgataaaacaggc tggagaaaatacatggcaagcccaataaaggacgtaaatcactacgcagacaacccaaataaggtattgtacatcactga caacccaattaaggtatcgtacatcactgtcaacccaaataaggtatcgaacatcactgacaacccaaacaaggtatcga acatcacagacagcccatgtaaggtatcgtacattactgacagcccaattaaggacgaaaatcactatgcagacaaccca aataaggtatcgtacgtcaacgacaacccaaataaggtatcgtacatcgctgacaacccaaataaggacccaaataaggt atcgtacatcgctgacaacccaaataaggacccaaaaaaggtatcgtacatcgctgacaacccaaataaggtatcgtaca tcgctgacaacccaaataaggtatcgcacagcactaccctgacagccaaagtaaggtatcgtacatttgtacatcacaac actgtcagtcctagtaaggtaaagtacatcacatgcatatattactaccacgagaagtaa |
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Protein
| Protein ID | pfu_aug2.0_61.1_03542.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03542.t1 MDSTTSAATTTEATTTEATTTTEATTTTTETTTQTTTTIPATTETTTPGTPPPMAKMMESELFGTVDGEDIYKYTLKNIH DVEISVINYGGIITNILVPDRDGNLADVTLGFDNLDEYTVNPSYFGAIVGRYANRVANGQFIIDGATYNIPKIQHWVNSL HGGTKGFDKGSGTIFDHQVNIFAEKYTPVHPDGHLIPKGVIQLVDGKAYDLREKKTLGDVIPSAPGGLGFDINYSFDKTG WRKYMASPIKDVNHYADNPNKVLYITDNPIKVSYITVNPNKVSNITDNPNKVSNITDSPCKVSYITDSPIKDENHYADNP NKVSYVNDNPNKVSYIADNPNKDPNKVSYIADNPNKDPKKVSYIADNPNKVSYIADNPNKVSHSTTLTAKVRYRTFVHHN TVSPSKVKYITCIYYYHEK |
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