Gene
| Gene Model ID | pfu_aug2.0_61.1_03545 |
|---|---|
| Locus | scaffold61.1 : 546516 ... 557758 : + |
| To GenomeBrowser | scaffold61.1:546516..557758 |
| Genes list of scaffold | scaffold61.1 |
| Synonym | pfu_aug1.0_7124.1_45586 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| visual system homeobox 2-like | GO:0005634 GO:0006355 GO:0007275 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_61.1_03545.t1 | 1 | 1 | Homeobox | 180 | 236 | 3.7e-22 | 77.7 | 1.1e-25 | 7.9e-22 | 76.6 |
| pfu_aug2.0_61.1_03545.t1 | 1 | 1 | OAR | 315 | 333 | 3.0e-06 | 26.5 | 8.9e-10 | 6.6e-06 | 25.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_61.1_03545.t1 | gi|524901009|ref|XP_005106919.1| | PREDICTED: visual system homeobox 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_61.1_03545.t1 | gi|676458446|ref|XP_009054978.1| | hypothetical protein LOTGIDRAFT_232402 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_61.1_03545.t1 | gi|291233545|ref|XP_002736712.1| | PREDICTED: visual system homeobox 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_61.1_03545.t1 | gi|72046825|ref|XP_781184.1| | PREDICTED: visual system homeobox 2 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_61.1_03545.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03545.t1 atgaattcaattttgagctccacttcctcccagttgatgcccatgcaaccgcattataacggaatgaacaatggacttta tccgcagatggcgaattcacagactcagaaatcatcttttggaattcatgaaattcttggtttaactgctccaacatgtc gacagaatccaagtcccgacatcctggataatctcgggatcacatcaccatccagcggaaacaacaatatgtatggacta aatcccggaactgttaacggacagtatctacccgcagaacagcaatatcagaatttcttcagggatcattcgcttcagca acaaagttccacgttttatccttggaaatatgaccccgtgaatcaaattcctacaaattctaactcagtaataaacaatc aagtacccagtagatattctgacggcatcggattcggaataaaagctcctatactggaagaagccacaactcgaccagag tgtgcacaactcgataaaacggaaacgaactcttcatcaaaaaagaacaaaaagagacgtcgtcataggacgatattcac cagctatcaggtggacgagttggagaagacgtttaaggaggcacactaccctgatctttatgccagagaggtgttggctc tcaaaatagatctaccggaagatagaatacaggtgtggttccaaaaccgcagagccaaatggcgcaaaacagagaaaact tgggggaaaagcagcatcatggcggagtacggattgtatggtgccatggtccggcatgcactaccacttcctgatgcgat agtgaagagtgcagaaaaggggatagacaaatcatccgctccgtggcttctaggaatgcacaaaaagtcgatcgaagcat ccaagaaaatgaaggaggagggaatcatcgatggatcggagatgaaaggatgtgtaaaagatgacttccgctcggaaagc attgcggctttacgcgcgaaagcccagcaacacagtgcccggatgttggaagcgcttggcagcgagggtaaagtagacga caacggaagtgaacattcatttgacagttctttcttctcggatgcagacgatataggcagtgatcatgtcagaaattaa |
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Protein
| Protein ID | pfu_aug2.0_61.1_03545.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03545.t1 MNSILSSTSSQLMPMQPHYNGMNNGLYPQMANSQTQKSSFGIHEILGLTAPTCRQNPSPDILDNLGITSPSSGNNNMYGL NPGTVNGQYLPAEQQYQNFFRDHSLQQQSSTFYPWKYDPVNQIPTNSNSVINNQVPSRYSDGIGFGIKAPILEEATTRPE CAQLDKTETNSSSKKNKKRRRHRTIFTSYQVDELEKTFKEAHYPDLYAREVLALKIDLPEDRIQVWFQNRRAKWRKTEKT WGKSSIMAEYGLYGAMVRHALPLPDAIVKSAEKGIDKSSAPWLLGMHKKSIEASKKMKEEGIIDGSEMKGCVKDDFRSES IAALRAKAQQHSARMLEALGSEGKVDDNGSEHSFDSSFFSDADDIGSDHVRN |
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