Gene
| Gene Model ID | pfu_aug2.0_61.1_03547 |
|---|---|
| Locus | scaffold61.1 : 563842 ... 579235 : - |
| To GenomeBrowser | scaffold61.1:563842..579235 |
| Genes list of scaffold | scaffold61.1 |
| Synonym | pfu_aug1.0_84704.1_13324 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_61.1_03547.t1 | 2 | 1 | Na_Ca_ex | 50 | 106 | 1.1e-15 | 57.4 | 1.9e-08 | 0.00014 | 21.4 |
| pfu_aug2.0_61.1_03547.t1 | 2 | 2 | Na_Ca_ex | 243 | 296 | 1.1e-15 | 57.4 | 1.7e-14 | 1.3e-10 | 41.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_61.1_03547.t1 | gi|657752520|ref|XP_008311733.1| | PREDICTED: sodium/potassium/calcium exchanger 4 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_61.1_03547.t1 | gi|632971172|ref|XP_007902042.1| | PREDICTED: sodium/potassium/calcium exchanger 4 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_61.1_03547.t1 | gi|632971174|ref|XP_007902043.1| | PREDICTED: sodium/potassium/calcium exchanger 4 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_61.1_03547.t1 | gi|642923906|ref|XP_008193922.1| | PREDICTED: sodium/potassium/calcium exchanger 3-like isoform X3 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_61.1_03547.t1 | gi|572314086|ref|XP_006622723.1| | PREDICTED: sodium/potassium/calcium exchanger 4-like isoform X3 [Apis dorsata] | 4.2039e-45 |
Transcript
| Transcript ID | pfu_aug2.0_61.1_03547.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03547.t1 atgagatttgaacaagcataccacgagtttcctacagatgcatttacccttacacaaagagagcatggtgcatttatatt ccacgtccttttagtcgtctatatgtttgtggctttagccatagtctgtgatgattattttgttacttctttggacaaaa tatgctcggtgatagttttatcttggtggtcttttggcagggacgccgcctattactctctatcagtcatcatcctcatc ctggtagttgctgatggtaaagtaacctggtatgaatcattaattatgctcatcttctatggaggctacattgtcgtaat gaagtttaaccacaccttacaggcttgggttgcggataaggtggaccgtattaagtcttccaacatcctgccattcaacg gtgctgccaaaaccttcgccacagattatgagcaatttgaagatgacgacgatgatgtgttcacggtggtggaaaataga ccaaccaaatcaaatgatgtagatcctgacgagtatgccaagaagacccatattaagtttactatgaccattgaaggaga gaatgttgacttttggaaacgtgttcccagcatagatgaaggatacgtaaacttagcccgctgggtggcggtgtatcctt tgaggtttatgatgtattataccgtcccagactgcagaaaaccaagatgggagaattggtttatgcttacgtttatcatg tccatcatctggatagctgtcttctcctacgtcatggtctggatggtaacgataataggatttacatggagtataccaga cagtgtaatggggatcaccttcctagcggccggtactagtatacccgacgccatggccagtgtctttgtcgcaaaacaag gacaacgttctttgttgtctttgtga |
|
Protein
| Protein ID | pfu_aug2.0_61.1_03547.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_61.1_03547.t1 MRFEQAYHEFPTDAFTLTQREHGAFIFHVLLVVYMFVALAIVCDDYFVTSLDKICSVIVLSWWSFGRDAAYYSLSVIILI LVVADGKVTWYESLIMLIFYGGYIVVMKFNHTLQAWVADKVDRIKSSNILPFNGAAKTFATDYEQFEDDDDDVFTVVENR PTKSNDVDPDEYAKKTHIKFTMTIEGENVDFWKRVPSIDEGYVNLARWVAVYPLRFMMYYTVPDCRKPRWENWFMLTFIM SIIWIAVFSYVMVWMVTIIGFTWSIPDSVMGITFLAAGTSIPDAMASVFVAKQGQRSLLSL |
|