Gene
| Gene Model ID | pfu_aug2.0_611.1_04397 |
|---|---|
| Locus | scaffold611.1 : 36724 ... 81985 : - |
| To GenomeBrowser | scaffold611.1:36724..81985 |
| Genes list of scaffold | scaffold611.1 |
| Synonym | pfu_aug1.0_16752.1_18384 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_611.1_04397.t1 | 5 | 1 | TSP_1 | 80 | 130 | 5.9e-28 | 96.7 | 5.8e-13 | 8.7e-09 | 35.3 |
| pfu_aug2.0_611.1_04397.t1 | 5 | 2 | TSP_1 | 137 | 187 | 5.9e-28 | 96.7 | 1.1e-12 | 1.6e-08 | 34.5 |
| pfu_aug2.0_611.1_04397.t1 | 5 | 3 | TSP_1 | 194 | 235 | 5.9e-28 | 96.7 | 8.3e-13 | 1.2e-08 | 34.8 |
| pfu_aug2.0_611.1_04397.t1 | 5 | 4 | TSP_1 | 1024 | 1071 | 5.9e-28 | 96.7 | 0.0001 | 1.5 | 8.9 |
| pfu_aug2.0_611.1_04397.t1 | 5 | 5 | TSP_1 | 1070 | 1091 | 5.9e-28 | 96.7 | 0.13 | 1900.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_611.1_04397.t1 | gi|542225271|ref|XP_003445167.2| | PREDICTED: hemicentin-1-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_611.1_04397.t1 | gi|617396299|ref|XP_007550974.1| | PREDICTED: hemicentin-1 [Poecilia formosa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_611.1_04397.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_611.1_04397.t1 atgaagttaaattggtttgttgtcaagaatgcagtattatacgttattacggttccagaatgcaatgaggactacaggag tagacagaatgatcctatggatggctttgatctagaggatggctgcgacgatgatgatgttgattttagaaaccagctga atgaattctttggtgaattcaccataagcaaacgcatactcaagcgggatggccattgtaaaatgaatggacattggtca aactggcatgactggagtatatgttttaaaaattgtggcatgggtactaagacaagggtacgggcatgcgataatccaag tcctgctaatggagggttaaactgcagtggatctattacagagacttcacaatgtaaaatcaaggagtgcccagtaaatg gacaatggtcaaactggaatagctggggtgattgttctaaggattgcggcatgggtacaaagacaagggttcggttatgt gacaatccaagtcctgcttatggcggctcacgttgtagtggatccaacacaattaattcacaatgttacaataaagcttg tccagtgaatggacaatggtcgaactggaacagctggggtaactgttcaaaatcttgtggtttaggaacaaagaagagac ttaggctgtgtaacaacccacaccgtgctcatggaggattaccgtgtaatggatccgatactgaggtgtcacaattcatt tcaaccatcgcccccggttcaacaaagatggttacgacgttattgaatacaacgactcacaccaaaaacgcacagcatgc tggttcaagcgctgcatcccacaccaaaagcacacataatgcggtatcgaacacaaagacagtagcgtcaacgtcattca aatcaaaatcaacaaacaatattgtttcccacacaaaaagcactaatacatccattctgaaatcaacatcaaaacagtct acaatcccaaatatcaaacctacacaattcacaactcttcaaacgaagacaatgcaaaccacagtaaaaaatactaactc cacgcaaagccttcttactaaccaaaactcaacatcggcttcgttttcccaaacaaaagtaatgcagtcaaccatcttcg aaacaaaaccatcacaaactaatgctccgaaaccaaatacaacctatattaaatcgagccaacctaccattcctgttaca acacaaacaacatcaggtgcttcctcaagtatattgaatggtcatgtttcccagtcaactcaaagggtgtctacaaccac actaacctatatgaagccaacgagtacaaaaccatcatcaactgtaattatgagaaacaaaggagaggaagccttcaatg ttagagaaagacgttttggtggttatatgggatcacagattagctggcaaggttccaatatgggtcccggctcgcatatg agctcaatgcttggaccaggctcgcatacggaccagcatctgagcgcaaattttggttctggctcgcatacgggactgca cgtgggctcaatttttgaaccagactcgcatacggaccagcatatgagctcaatttttggttcaggctcgcttacaggcc tacacatgggctcaatctttgaaccaggctcgcatacggatcaccatctgagcgcaagttttggttctggctcgaatgcg gaacaacacatgagctcatatatgggttcaggttcacactcaaactctggctctgaatgggatttctttcatggatcgtc aaacaaaatcttcgagcccatgaaacgttttaacacgccaccgatcacaatgaaagtaacaactacaacaccaaggacta taacatcgacgactacaacaatgacaacgacaccagtgactacaacacaaacaacgactgtaacaccgactacttcaaca tcgacgagtacaacaccgtctactacaattccaacgactacaagtactagaataccaactactacagcaaccgcaaaaag tacaaataagtcgataacaacatccaaaacaacatcgggaaaacctgtatttgtctggaaaacagttccacattcacagc caaactcgcattggatatcgggctcaaaacaacactcacaccacgactcacaaggggacaaaggatctcagccgaattta cagccacactcgcattggaactcgggctcaacacagcactcacactataattcgtatggtaaccatgaatcacagacaaa ttcacagccaaactcgcatgggaactcggactcaaaacaacactcatacctcaactcgcaaggtaaccaaggatcagaga caaattcacagtctaactcacaatcaaatccattccttttcataaagtgttcgaacacttcgcatagtacaatgaaagca acaatgccaacaaaaacggctacaccaacagtaagaattatccagaagacatcatcaacgactacaataccgacaactac aacgactacaacaccaagtacatctacaacaccaacaacaaccacaaaaataccgacaacaacatcgacgactacaacga cttcaacaccaactacaacaccgacgactacaacaccaacaccaaccacaacgactacaacaccaacaccaactataacg actacaacaccaacggcaactacaacaaaaccaactacaacaccgacgacaacaaaaccaactacaacaccgacaactac aacgactttaacaccaacgactacaacaccgacaactacaacgactttaacaccaacgactttaacaccaacgactacaa caccgacaactacaacaccaacgacgccaacaaccaagggtaaaccagtattcgtttggaaaacagttccacgccgctca agagatgaatcctttgctgtcaagctgagacgttgtttttctggaggtcgatgtgacattggccaacaaggagacccgca agatacaatgaactcaaaatccaatcgacgtagattcatatattatcctcaacgtgaacaaaacaaaattgtaaatccaa tagccatattcttcacagcacattggggcagttggtaccctattggtccttgtattccaagttgtggatacggagtaaga actgaggcacattcttgtttttatggctacgctcctggctacaactgtgttggtgcccctaccagggtcataccatgctt tggacctccgtgcagaggttcccatacaacaagacgtagagtaaaggtcactacaaagtcaaagacaaaaacaactacaa catcggcaacaaaaacaactacaacatcggcaacaaaaacaactataacatcggcatcaaagacatctccaacatcggca tcaaaaacaactagtacatatttcaaaaatgacaatcaaaaggctctgaaatccttgaaaagatataaaacagaacttcc gcacgagaaaacagaacttccgtacaacaaaacagaacttcagagaaaacaggacttccccacgagaaaacaggacttcc caacgactaaaacagaacttcccctcgagaaaagaaaacttgacaaacagacaaagacaagaacacaacagaaataa |
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Protein
| Protein ID | pfu_aug2.0_611.1_04397.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_611.1_04397.t1 MKLNWFVVKNAVLYVITVPECNEDYRSRQNDPMDGFDLEDGCDDDDVDFRNQLNEFFGEFTISKRILKRDGHCKMNGHWS NWHDWSICFKNCGMGTKTRVRACDNPSPANGGLNCSGSITETSQCKIKECPVNGQWSNWNSWGDCSKDCGMGTKTRVRLC DNPSPAYGGSRCSGSNTINSQCYNKACPVNGQWSNWNSWGNCSKSCGLGTKKRLRLCNNPHRAHGGLPCNGSDTEVSQFI STIAPGSTKMVTTLLNTTTHTKNAQHAGSSAASHTKSTHNAVSNTKTVASTSFKSKSTNNIVSHTKSTNTSILKSTSKQS TIPNIKPTQFTTLQTKTMQTTVKNTNSTQSLLTNQNSTSASFSQTKVMQSTIFETKPSQTNAPKPNTTYIKSSQPTIPVT TQTTSGASSSILNGHVSQSTQRVSTTTLTYMKPTSTKPSSTVIMRNKGEEAFNVRERRFGGYMGSQISWQGSNMGPGSHM SSMLGPGSHTDQHLSANFGSGSHTGLHVGSIFEPDSHTDQHMSSIFGSGSLTGLHMGSIFEPGSHTDHHLSASFGSGSNA EQHMSSYMGSGSHSNSGSEWDFFHGSSNKIFEPMKRFNTPPITMKVTTTTPRTITSTTTTMTTTPVTTTQTTTVTPTTST STSTTPSTTIPTTTSTRIPTTTATAKSTNKSITTSKTTSGKPVFVWKTVPHSQPNSHWISGSKQHSHHDSQGDKGSQPNL QPHSHWNSGSTQHSHYNSYGNHESQTNSQPNSHGNSDSKQHSYLNSQGNQGSETNSQSNSQSNPFLFIKCSNTSHSTMKA TMPTKTATPTVRIIQKTSSTTTIPTTTTTTTPSTSTTPTTTTKIPTTTSTTTTTSTPTTTPTTTTPTPTTTTTTPTPTIT TTTPTATTTKPTTTPTTTKPTTTPTTTTTLTPTTTTPTTTTTLTPTTLTPTTTTPTTTTPTTPTTKGKPVFVWKTVPRRS RDESFAVKLRRCFSGGRCDIGQQGDPQDTMNSKSNRRRFIYYPQREQNKIVNPIAIFFTAHWGSWYPIGPCIPSCGYGVR TEAHSCFYGYAPGYNCVGAPTRVIPCFGPPCRGSHTTRRRVKVTTKSKTKTTTTSATKTTTTSATKTTITSASKTSPTSA SKTTSTYFKNDNQKALKSLKRYKTELPHEKTELPYNKTELQRKQDFPTRKQDFPTTKTELPLEKRKLDKQTKTRTQQK |
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