Gene
| Gene Model ID | pfu_aug2.0_612.1_07720 |
|---|---|
| Locus | scaffold612.1 : 17786 ... 52523 : + |
| To GenomeBrowser | scaffold612.1:17786..52523 |
| Genes list of scaffold | scaffold612.1 |
| Synonym | pfu_aug1.0_11818.1_53747 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_612.1_07720.t1 | 3 | 1 | Sushi | 139 | 171 | 1.0e-13 | 51.3 | 2.2e-07 | 0.0016 | 18.7 |
| pfu_aug2.0_612.1_07720.t1 | 3 | 2 | Sushi | 176 | 225 | 1.0e-13 | 51.3 | 2.3e-06 | 0.017 | 15.4 |
| pfu_aug2.0_612.1_07720.t1 | 3 | 3 | Sushi | 233 | 283 | 1.0e-13 | 51.3 | 9.3e-10 | 6.9e-06 | 26.3 |
| pfu_aug2.0_612.1_07720.t1 | 1 | 1 | MAM | 297 | 449 | 6.8e-20 | 71.4 | 1.6e-23 | 1.2e-19 | 70.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_612.1_07720.t1 | gi|196011459|ref|XP_002115593.1| | hypothetical protein TRIADDRAFT_59472 [Trichoplax adhaerens] | 6.0e-15 |
| pfu_aug2.0_612.1_07720.t1 | gi|260835802|ref|XP_002612896.1| | hypothetical protein BRAFLDRAFT_151415 [Branchiostoma floridae] | 6.0e-14 |
| pfu_aug2.0_612.1_07720.t1 | gi|699246895|ref|XP_009859859.1| | PREDICTED: MAM and LDL-receptor class A domain-containing protein 1-like [Ciona intestinalis] | 6.0e-14 |
| pfu_aug2.0_612.1_07720.t1 | gi|449677712|ref|XP_004208911.1| | 8.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_612.1_07720.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_612.1_07720.t1 atgggggccctgtcttctctaaagaggtttggacagggcccgtcatggagtcagtcagtcagagtgcaagttttaagaat gcgcatgtacaagactgtagattggtcaagtaccaagcctagtatccgtctggtgacattaggatcatatccacgagata gactagactgtcaaatattctcctgggattcaatgagtattagccagttcgaatcaaaagacaactgtacacactacagc tcccaaggtactcctctgaacacagacagatgtgacggagcgaaatgtgcggagcatcatacatgtgtggatatgctgga tgggtcggattactgtgtgagaacagaatgcagtgctccacagtttgtgaatgtgaaggaatctgccggtatggattttg ttgggggctggagatcattcacgtgtaataacggatacgagataagttatggagtgacttcacaattcatgacgtgtaaa tctaacggagaatggactggcacaacaaactgcacaatcgaaaaatgtcctgaaccttcagcgccaagtaatgggatcat atttcccggtgaaaacatcatcggatcaatacggaacgttcaatgtatcaatggatatctcaatcttggtgttcctccta caattgaatgcttcgacaacagaacatggaccaactggactggctcttgtaaggcatgtgatgaccctaatatcattcca catgctgatatcagtgacggaaacgtaacagtaggaagtaacaggacgtatacctgtaacatcggtttcgaagacaacgg agaatcccccttaataacatgcaatgactctgctatgtggaacacgactgagttttcttgtacagtacttctcatacatg tatttgattttgaggatgatgacctgtacaactttgttgatgcgagtagttatttttctttcgaatcaaaaactggaagt acaacatcatcagatactggaccaacaggtgcctaccatggtacaaagtacagatactacgagggaagcggtccggaaca aaacgatgtagcgcgaatggagtccgacgtatacttcaatgctggagtgcaatgtatagatttcttctatagcatgtatg gggaggacatagggacaatgagtatcaagtaccaagggtacggatcctcgtcagagactctcatttggagtgactcgggt gacaagcaagaaccaacctggttcaatgctaatgtcacagtcaatgccacagagatattcaagctgattgttgaagccac aaaaataggatccggttataaatctgatgcggctatagactacataagactgtttgacggtgcatgctaa |
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Protein
| Protein ID | pfu_aug2.0_612.1_07720.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_612.1_07720.t1 MGALSSLKRFGQGPSWSQSVRVQVLRMRMYKTVDWSSTKPSIRLVTLGSYPRDRLDCQIFSWDSMSISQFESKDNCTHYS SQGTPLNTDRCDGAKCAEHHTCVDMLDGSDYCVRTECSAPQFVNVKESAGMDFVGGWRSFTCNNGYEISYGVTSQFMTCK SNGEWTGTTNCTIEKCPEPSAPSNGIIFPGENIIGSIRNVQCINGYLNLGVPPTIECFDNRTWTNWTGSCKACDDPNIIP HADISDGNVTVGSNRTYTCNIGFEDNGESPLITCNDSAMWNTTEFSCTVLLIHVFDFEDDDLYNFVDASSYFSFESKTGS TTSSDTGPTGAYHGTKYRYYEGSGPEQNDVARMESDVYFNAGVQCIDFFYSMYGEDIGTMSIKYQGYGSSSETLIWSDSG DKQEPTWFNANVTVNATEIFKLIVEATKIGSGYKSDAAIDYIRLFDGAC |
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