Gene
| Gene Model ID | pfu_aug2.0_612.1_07725 |
|---|---|
| Locus | scaffold612.1 : 195726 ... 202425 : + |
| To GenomeBrowser | scaffold612.1:195726..202425 |
| Genes list of scaffold | scaffold612.1 |
| Synonym | pfu_aug1.0_2081.1_66192 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_612.1_07725.t1 | 1 | 1 | Sushi | 136 | 188 | 1.1e-06 | 28.8 | 9.4e-10 | 2.8e-06 | 27.5 |
| pfu_aug2.0_612.1_07725.t1 | 1 | 1 | MAM | 175 | 277 | 1.4e-17 | 63.9 | 7.2e-21 | 2.1e-17 | 63.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_612.1_07725.t1 | gi|260835800|ref|XP_002612895.1| | hypothetical protein BRAFLDRAFT_227819 [Branchiostoma floridae] | 3.0e-12 |
| pfu_aug2.0_612.1_07725.t1 | gi|260835804|ref|XP_002612897.1| | hypothetical protein BRAFLDRAFT_151452 [Branchiostoma floridae] | 3.0e-11 |
| pfu_aug2.0_612.1_07725.t1 | gi|260824625|ref|XP_002607268.1| | hypothetical protein BRAFLDRAFT_125174 [Branchiostoma floridae] | 1.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_612.1_07725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_612.1_07725.t1 atggaaaacttgagacacatagaatttatcttggcagcatttcttatactaaaacatgatataagtttttctgtttctat gactacaatttttggaagaggatattgcttaacaggagttccatttgaggtagatgtatcaataggacccagtgcctgtg ttaaagattgcttaaggaatgatcgatgtttgtccgtaacgtattggttggataattttatctgcgaattcttctcaaca gattccacgaaatttgcggattactttgaaaatagtaattgtgtacactacggttttgattcagaaggcttcgtacaagt acaacaatcaattcgaaatggatgtccaatgttaacgaaatctatagaactgtcaagcggaggaatagcttgtatagaag cagattgtccggaacccttatcctacgggaacgtcttggttcttgaagggaaaaactacattgatgctcagagacaatgt gagtgcaagacaaaatatacaactgtacctgcagatgttattacatgtcagcagtcgctaacgtggacagaggagactat gtgcgcaactgaaatcaagtgcctcgagttctactatagcatgtatggagaagacataggggttttatcagtgtattaca tagaagaaggtgcatcacagaaaaatgatctttggaatgcaaccggtgatatgggaactgacgaatggtttcaagcaaag ttctccttagacattcaaactaacttcaagctgatttttgaagcgagtgacggaggctacaatttttatggtgacattgc tgttgactacatagtgctgtccgatacctgttag |
|
Protein
| Protein ID | pfu_aug2.0_612.1_07725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_612.1_07725.t1 MENLRHIEFILAAFLILKHDISFSVSMTTIFGRGYCLTGVPFEVDVSIGPSACVKDCLRNDRCLSVTYWLDNFICEFFST DSTKFADYFENSNCVHYGFDSEGFVQVQQSIRNGCPMLTKSIELSSGGIACIEADCPEPLSYGNVLVLEGKNYIDAQRQC ECKTKYTTVPADVITCQQSLTWTEETMCATEIKCLEFYYSMYGEDIGVLSVYYIEEGASQKNDLWNATGDMGTDEWFQAK FSLDIQTNFKLIFEASDGGYNFYGDIAVDYIVLSDTC |
|