Gene
| Gene Model ID | pfu_aug2.0_612.1_07730 |
|---|---|
| Locus | scaffold612.1 : 253108 ... 272291 : - |
| To GenomeBrowser | scaffold612.1:253108..272291 |
| Genes list of scaffold | scaffold612.1 |
| Synonym | pfu_aug1.0_14447.1_10703 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vacuolar protein sorting-associated protein 45 | GO:0006904 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_612.1_07730.t1 | 1 | 1 | Sec1 | 24 | 368 | 0.0 | 314.2 | 0.0 | 0.0 | 313.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_612.1_07730.t1 | gi|524902146|ref|XP_005107406.1| | PREDICTED: vacuolar protein sorting-associated protein 45-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_612.1_07730.t1 | gi|291230004|ref|XP_002734962.1| | PREDICTED: vacuolar protein sorting-associated protein 45-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_612.1_07730.t1 | gi|676423898|ref|XP_009044154.1| | hypothetical protein LOTGIDRAFT_208594 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_612.1_07730.t1 | gi|700357439|ref|XP_009923113.1| | PREDICTED: vacuolar protein sorting-associated protein 45 isoform X1 [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_612.1_07730.t1 | gi|700357441|ref|XP_009923114.1| | PREDICTED: vacuolar protein sorting-associated protein 45 isoform X2 [Haliaeetus albicilla] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_612.1_07730.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_612.1_07730.t1 cttgtaccggtgcagccgctggaaccggtgccggtggagctggagggtcgcttggaccggacgtcgacgatttcagtaat gtgataagtaagcaggaagtaaaggtgttagcagaggctgatgatcaggaagtagtcagggaggtccaggaattttttgg tgattacatagctgttaatccacatctcttcacattaaacatccctatgtgttgtcaggcattgaattggtcacctggat cactcacccggacagtggaggggcttacttcagtactgctctccctgaaaaaatgtccaatgatcagataccaaaactca tcggaaatggctcgtagattggcagagaatgtcagacaaatcataaacagagaagcagctctttttgagttcagaaaaac cgatgtggcacctgtactactgatattagacagacgagatgatgcagtgacgcctttactcaatcagtggacataccagg ccatggtacacgagttattaggaataaataacaacagaatcaatctatcaaacgtacctggtataagtaaagatctacaa gaagttgtgctctctgctgaacatgatgaattctatgcaaataatatgtacaataactttggtgagattggtaccaatat taaagatttaatggaagaattccaaaacaaatctaaaagtcaagctaaagtcgagtccatagctgatatgaaggcattta ttgagaattatccacaatttaagaagatgtcagggacagtgtcaaaacatgttacagttgtaggggagttatcaagactt gttggtaaacataatttattagagatatcagagacagaacaagagcttgcctgtcaaggagaccactcagcttgtttaca gagaatcaaggctctgttatccaatgagaagactcagcagcttgacatgttacgcctggttatgttatactccctgagat acgagagtcacagtaataacgatatagctggtctactggaagtcctacgcaaaaaaggtgtcagcgataaactcagacat atggtacatggagtattggagtatggaggaaggaaggcgagggggagtgatctgtttggtacacaagatgctgtagcatt taccaagagattcttcaaaggactcaagaatcatttgctgtgtattaacctttgctactttcacgatgaattttgtatca ttgaagaaaggaggggatctccaacaacactaggttgcagcacccacagcaaaaccccaaaacacccaatgcaaaaaaca cagaacacacacccacagaaagagacacaaaagggacatggaacaccaactcacaccataaaaacattaaacataataga ccacacataa |
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Protein
| Protein ID | pfu_aug2.0_612.1_07730.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_612.1_07730.t1 CTGAAAGTGAGGAGGSLGPDVDDFSNVISKQEVKVLAEADDQEVVREVQEFFGDYIAVNPHLFTLNIPMCCQALNWSPGS LTRTVEGLTSVLLSLKKCPMIRYQNSSEMARRLAENVRQIINREAALFEFRKTDVAPVLLILDRRDDAVTPLLNQWTYQA MVHELLGINNNRINLSNVPGISKDLQEVVLSAEHDEFYANNMYNNFGEIGTNIKDLMEEFQNKSKSQAKVESIADMKAFI ENYPQFKKMSGTVSKHVTVVGELSRLVGKHNLLEISETEQELACQGDHSACLQRIKALLSNEKTQQLDMLRLVMLYSLRY ESHSNNDIAGLLEVLRKKGVSDKLRHMVHGVLEYGGRKARGSDLFGTQDAVAFTKRFFKGLKNHLLCINLCYFHDEFCII EERRGSPTTLGCSTHSKTPKHPMQKTQNTHPQKETQKGHGTPTHTIKTLNIIDHT |
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