Gene
| Gene Model ID | pfu_aug2.0_614.1_14386 |
|---|---|
| Locus | scaffold614.1 : 168415 ... 178971 : + |
| To GenomeBrowser | scaffold614.1:168415..178971 |
| Genes list of scaffold | scaffold614.1 |
| Synonym | pfu_aug1.0_726.1_22268 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_614.1_14386.t1 | 1 | 1 | FBA | 3 | 166 | 9.8e-32 | 110.4 | 1.2e-35 | 1.8e-31 | 109.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_614.1_14386.t1 | gi|260821043|ref|XP_002605843.1| | hypothetical protein BRAFLDRAFT_123802 [Branchiostoma floridae] | 8.0e-28 |
| pfu_aug2.0_614.1_14386.t1 | gi|241121671|ref|XP_002403295.1| | conserved hypothetical protein [Ixodes scapularis] | 4.0e-26 |
| pfu_aug2.0_614.1_14386.t1 | gi|746868954|ref|XP_011065621.1| | PREDICTED: F-box only protein 44-like [Acromyrmex echinatior] | 1.0e-25 |
| pfu_aug2.0_614.1_14386.t1 | gi|755941361|ref|XP_011298414.1| | PREDICTED: F-box only protein 6-like [Fopius arisanus] | 4.0e-25 |
| pfu_aug2.0_614.1_14386.t1 | gi|657771352|ref|XP_008317413.1| | PREDICTED: F-box only protein 6-like [Cynoglossus semilaevis] | 5.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_614.1_14386.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_614.1_14386.t1 atgtggcattggtctgtggttgaggagggcggtgatggcttccgtattgaaaggaatccagctttttgtcatcgtgtgga acaatatgcccctcgaaaaggtcatttagaaggttttacagagccagtgagttgctggtctacatcataccaatggtgtg agaaagaacaacttattgatctggtcaacgaggggtgtgaggaggtcgacctcgacaaaaatcctccaaaagtcacaata tcggagtggtatgcagcaagaggggactgcaaggtcacacacgacctcaaagtctactttttaggcagagataaacgcac cataaacacgtttaaagagcaaaacaaattactggcaggaaaagagtggtttaaggtagaacattctcaggttttaccag ctggtacacgttacatcttatactcacataaaggcaaagatgaacaatactgggcggggtattatggggccaaaatgacg ttatcctctgtaatactcactcctccagaaggtaaacatgaaccagtcattggaatatctgcataa |
|
Protein
| Protein ID | pfu_aug2.0_614.1_14386.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_614.1_14386.t1 MWHWSVVEEGGDGFRIERNPAFCHRVEQYAPRKGHLEGFTEPVSCWSTSYQWCEKEQLIDLVNEGCEEVDLDKNPPKVTI SEWYAARGDCKVTHDLKVYFLGRDKRTINTFKEQNKLLAGKEWFKVEHSQVLPAGTRYILYSHKGKDEQYWAGYYGAKMT LSSVILTPPEGKHEPVIGISA |
|