Gene
| Gene Model ID | pfu_aug2.0_6152.1_09529 |
|---|---|
| Locus | scaffold6152.1 : 1 ... 21145 : - |
| To GenomeBrowser | scaffold6152.1:1..21145 |
| Genes list of scaffold | scaffold6152.1 |
| Synonym | pfu_aug1.0_10663.1_17659 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_6152.1_09529.t1 | 4 | 1 | EB | 19 | 62 | 4.8e-13 | 48.9 | 2.8e-06 | 0.0052 | 16.8 |
| pfu_aug2.0_6152.1_09529.t1 | 2 | 1 | Ig_3 | 68 | 143 | 7.1e-09 | 36.0 | 2.2e-11 | 4.0e-08 | 33.6 |
| pfu_aug2.0_6152.1_09529.t1 | 2 | 1 | V-set | 68 | 155 | 3.8e-08 | 33.2 | 1.2e-10 | 2.2e-07 | 30.7 |
| pfu_aug2.0_6152.1_09529.t1 | 3 | 1 | Ig_2 | 70 | 156 | 2.0e-13 | 50.2 | 1.1e-16 | 2.1e-13 | 50.2 |
| pfu_aug2.0_6152.1_09529.t1 | 3 | 1 | I-set | 75 | 150 | 2.1e-13 | 49.9 | 5.9e-16 | 1.1e-12 | 47.6 |
| pfu_aug2.0_6152.1_09529.t1 | 3 | 1 | ig | 79 | 140 | 1.4e-09 | 37.9 | 9.5e-13 | 1.8e-09 | 37.6 |
| pfu_aug2.0_6152.1_09529.t1 | 4 | 2 | EB | 160 | 198 | 4.8e-13 | 48.9 | 2.0e-05 | 0.036 | 14.1 |
| pfu_aug2.0_6152.1_09529.t1 | 4 | 3 | EB | 194 | 238 | 4.8e-13 | 48.9 | 7.6e-07 | 0.0014 | 18.6 |
| pfu_aug2.0_6152.1_09529.t1 | 4 | 4 | EB | 241 | 284 | 4.8e-13 | 48.9 | 5.3e-08 | 9.8e-05 | 22.3 |
| pfu_aug2.0_6152.1_09529.t1 | 4 | 1 | fn3 | 300 | 373 | 1.7e-29 | 101.7 | 1.8e-07 | 0.00033 | 20.7 |
| pfu_aug2.0_6152.1_09529.t1 | 3 | 2 | Ig_2 | 311 | 323 | 2.0e-13 | 50.2 | 5.3 | 9800.0 | -3.3 |
| pfu_aug2.0_6152.1_09529.t1 | 3 | 2 | ig | 328 | 354 | 1.4e-09 | 37.9 | 4.0 | 7300.0 | -2.9 |
| pfu_aug2.0_6152.1_09529.t1 | 3 | 2 | I-set | 362 | 390 | 2.1e-13 | 49.9 | 1.5 | 2800.0 | -1.8 |
| pfu_aug2.0_6152.1_09529.t1 | 4 | 2 | fn3 | 406 | 466 | 1.7e-29 | 101.7 | 3.0e-09 | 5.6e-06 | 26.3 |
| pfu_aug2.0_6152.1_09529.t1 | 2 | 2 | Ig_3 | 490 | 555 | 7.1e-09 | 36.0 | 0.14 | 270.0 | 2.1 |
| pfu_aug2.0_6152.1_09529.t1 | 4 | 3 | fn3 | 491 | 569 | 1.7e-29 | 101.7 | 7.5e-15 | 1.4e-11 | 44.3 |
| pfu_aug2.0_6152.1_09529.t1 | 3 | 3 | Ig_2 | 495 | 544 | 2.0e-13 | 50.2 | 1.4 | 2600.0 | -1.4 |
| pfu_aug2.0_6152.1_09529.t1 | 2 | 2 | V-set | 495 | 526 | 3.8e-08 | 33.2 | 2.3 | 4200.0 | -2.4 |
| pfu_aug2.0_6152.1_09529.t1 | 3 | 3 | ig | 497 | 557 | 1.4e-09 | 37.9 | 0.076 | 140.0 | 2.6 |
| pfu_aug2.0_6152.1_09529.t1 | 3 | 3 | I-set | 535 | 568 | 2.1e-13 | 49.9 | 1.7 | 3200.0 | -2.0 |
| pfu_aug2.0_6152.1_09529.t1 | 4 | 4 | fn3 | 594 | 634 | 1.7e-29 | 101.7 | 1.3e-05 | 0.024 | 14.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_6152.1_09529.t1 | gi|676492236|ref|XP_009065853.1| | hypothetical protein LOTGIDRAFT_169286 [Lottia gigantea] | 3.0e-14 |
| pfu_aug2.0_6152.1_09529.t1 | gi|512831880|ref|XP_002931677.2| | 1.0e-12 | |
| pfu_aug2.0_6152.1_09529.t1 | gi|514682397|ref|XP_004988782.1| | hypothetical protein PTSG_13098, partial [Salpingoeca rosetta] | 5.0e-12 |
| pfu_aug2.0_6152.1_09529.t1 | gi|514683202|ref|XP_004989183.1| | hypothetical protein PTSG_09826 [Salpingoeca rosetta] | 4.0e-11 |
| pfu_aug2.0_6152.1_09529.t1 | gi|529446057|ref|XP_005242736.1| | PREDICTED: phosphatidylinositol phosphatase PTPRQ [Falco peregrinus] | 6.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_6152.1_09529.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6152.1_09529.t1 atggagcatatctgcattcaattgctgctgatcctgactacactatgttcagatactgtagctgtaggtatcaatgaaag ttgtacagtgaatgctgactgtacagaatctgatcccaatacaaagtgctctggtgactctgtgtgtgtctgtaaggaca attatgtatatgttacagacaaatgtatcagtattcttaatgtgacagtatctcctccaccaagaataaagatcggagaa gctgtaacaatcagctgtgtcttaaatggccaacccactgctactaatatccagtggaaaaggaatgattctctgttaga tatcagtaatactgccagatatagttcaggaacagtgtcaaccccttcactgaccataaaaaatgttacaaggagtgatg ctgggtcataccaatgtttagctaccaatgacgcagggacaggagaaagtaataaagttactctcacaacaatggatcgt cagtttggagacagttgtggtggtgatttaccttgtgatgacagtaaggtcttacagtgtgttaacaacaagtgtgagtg taagaatacacactatcctgacaacaatgtctgctatgatagaaagcagttgaacgaggcctgtaatagtgtgatgctat gtgtaaatgaacctcaagtgacatgtaatggaggtgtttgtgtatgtaaaactgggtattatgatgacaatggtttagcc tcgggaggatcttgtaaagctaggaaaaacctaggagatagttgtactaccacagtgttgtgtcttgagaacatagaatg tgctacagacaataaatgtagatgtcctgacaacttctatgatgacaacaaaaataatcctaatggaacttgtaaagata taaatgaattaaaggtgacagccttcaccttgacagcatccacaaatgccatagtagtaacgtggacactacccacggca catacctatgtcagtcgttatgatgtcagatggaggataactggtactggaagtgcttacagcactacatcagtagggac tgctaacactctcactataaactatggtctgatggcaggacaggtttatgatgtctttattgaatctgtggacacttata cccaagttgtggaacaaaagattgcatctgatacaaatgttgttagattgaagccaaatccaccagagagtataaccaat ccttcagcacttgatgcaccaaaaataaatctgatgtggacagcgtctccaaatagcgtggtatcaaagtacatggtcat ggttgtagaggtcaatgctactgagaaaaccacaaccagcacaccaagtttgacagtaaatacagcacttgttcctggta tgaactataccatcaagataacagcagtaagtggtacaccttcaggagccggtggagagacgtatagtgtggctcatgag gaacgtattaggaccatggtggaaaagccaagtcctccagtgaatgtaaaatgtccaatgaaccctaaagacagatcgtt agagataacatggtctgctccagaccatcctaatggtatcatacagtattataaagtatatgtgtactatagcaatggtg cttcaaaggaagaaatcaatacaacaggagcagttactaccttcaatgtacacaaccttacaccagagtcgacttttggt tttgctgtcagtgctgtaaatgatggcgatgaaagcattagaactagtgatatgataactcgtatttattgtacaacaaa agcagcattatccacaatgccacagaacttggctgtcagtaacatagagagtaggaacttcacagtaaccttcaatcagc cagccacaccaaagggtagactgattggatatgtactgtttgtgtatcaggaggagaagtcaccacagaaatgtgtacaa aagattctgtttagatgctctgattgtggaaataattacacg |
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Protein
| Protein ID | pfu_aug2.0_6152.1_09529.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6152.1_09529.t1 MEHICIQLLLILTTLCSDTVAVGINESCTVNADCTESDPNTKCSGDSVCVCKDNYVYVTDKCISILNVTVSPPPRIKIGE AVTISCVLNGQPTATNIQWKRNDSLLDISNTARYSSGTVSTPSLTIKNVTRSDAGSYQCLATNDAGTGESNKVTLTTMDR QFGDSCGGDLPCDDSKVLQCVNNKCECKNTHYPDNNVCYDRKQLNEACNSVMLCVNEPQVTCNGGVCVCKTGYYDDNGLA SGGSCKARKNLGDSCTTTVLCLENIECATDNKCRCPDNFYDDNKNNPNGTCKDINELKVTAFTLTASTNAIVVTWTLPTA HTYVSRYDVRWRITGTGSAYSTTSVGTANTLTINYGLMAGQVYDVFIESVDTYTQVVEQKIASDTNVVRLKPNPPESITN PSALDAPKINLMWTASPNSVVSKYMVMVVEVNATEKTTTSTPSLTVNTALVPGMNYTIKITAVSGTPSGAGGETYSVAHE ERIRTMVEKPSPPVNVKCPMNPKDRSLEITWSAPDHPNGIIQYYKVYVYYSNGASKEEINTTGAVTTFNVHNLTPESTFG FAVSAVNDGDESIRTSDMITRIYCTTKAALSTMPQNLAVSNIESRNFTVTFNQPATPKGRLIGYVLFVYQEEKSPQKCVQ KILFRCSDCGNNYT |
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