Gene
| Gene Model ID | pfu_aug2.0_618.1_27592 |
|---|---|
| Locus | scaffold618.1 : 486 ... 19230 : + |
| To GenomeBrowser | scaffold618.1:486..19230 |
| Genes list of scaffold | scaffold618.1 |
| Synonym | pfu_aug1.0_89.1_57964 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_618.1_27592.t1 | 1 | 1 | Thioredoxin | 10 | 106 | 6.5e-28 | 96.4 | 5.1e-31 | 1.1e-27 | 95.7 |
| pfu_aug2.0_618.1_27592.t1 | 1 | 1 | Thioredoxin_2 | 20 | 95 | 8.9e-06 | 25.8 | 4.0e-08 | 8.5e-05 | 22.7 |
| pfu_aug2.0_618.1_27592.t1 | 1 | 1 | Thioredoxin_8 | 24 | 87 | 2.7e-06 | 27.4 | 2.5e-09 | 5.4e-06 | 26.4 |
| pfu_aug2.0_618.1_27592.t1 | 1 | 1 | PITH | 125 | 268 | 3.89561e-43 | 146.8 | 0.0 | 5.99756e-43 | 146.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_618.1_27592.t1 | gi|676468523|ref|XP_009058236.1| | hypothetical protein LOTGIDRAFT_217500 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_618.1_27592.t1 | gi|524912990|ref|XP_005111329.1| | PREDICTED: thioredoxin-like protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_618.1_27592.t1 | gi|91085787|ref|XP_974503.1| | PREDICTED: thioredoxin-like protein 1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_618.1_27592.t1 | gi|156542825|ref|XP_001608075.1| | PREDICTED: thioredoxin-like protein 1 isoform X1 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_618.1_27592.t1 | gi|195427918|ref|XP_002062022.1| | GK17306 [Drosophila willistoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_618.1_27592.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_618.1_27592.t1 atgacaggaactgtgagagttgttggagatgacgcacaatttcaaccagaattagcgaatgcggggacaaaacttgttgt agtagattttttcgccacatggtgtggaccatgtcacaggattgctcctttctttggacaactcagtctgaaatatacaa gtgttgttttcctgaaagtggatgttgaccaatgtcaagaaacagcacaatctcaaggtgtaactgctatgcccacattc ttattctataaaaataaagagaaagtagatgagttgagaggagcagatcagaatgcactggaagagaagatcaaacaatt gaagggaggagacgaagaggggtcagatgatgttgctgtcaaagggcatatggatttgtcatcgttcatcaataaggctg gatgtgaatgtttgaacgagtctgatgaacacacgttctcacatgggctaactacaaagggaggttacctggaatcagac tgtgatgaacagcttttaatgagtttagaatttacacagcagatgaagttacattcattaaagttatacgctcctgaaga gaatggaccaaagacagtaaaaatcttccagaatttacctcgagcattagactttgatcaggcagagagtatggaacctg tacagacactcgaattaactcccgcagatctgaaggagggcactctaatatctctacgatacgtcaaattccaaaatgtt agaaatgttactatatttgtgaaaaataatcagagtggaacagataatcccacacagatagattacattggttttgtagg cacaccggtagatacaacaaatatgtcagacttcaaaagggtagcaggaaagaaaggagaaagtcattaa |
|
Protein
| Protein ID | pfu_aug2.0_618.1_27592.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_618.1_27592.t1 MTGTVRVVGDDAQFQPELANAGTKLVVVDFFATWCGPCHRIAPFFGQLSLKYTSVVFLKVDVDQCQETAQSQGVTAMPTF LFYKNKEKVDELRGADQNALEEKIKQLKGGDEEGSDDVAVKGHMDLSSFINKAGCECLNESDEHTFSHGLTTKGGYLESD CDEQLLMSLEFTQQMKLHSLKLYAPEENGPKTVKIFQNLPRALDFDQAESMEPVQTLELTPADLKEGTLISLRYVKFQNV RNVTIFVKNNQSGTDNPTQIDYIGFVGTPVDTTNMSDFKRVAGKKGESH |
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