Gene
| Gene Model ID | pfu_aug2.0_62.1_06839 |
|---|---|
| Locus | scaffold62.1 : 1 ... 14895 : - |
| To GenomeBrowser | scaffold62.1:1..14895 |
| Genes list of scaffold | scaffold62.1 |
| Synonym | pfu_aug1.0_6474.1_52774 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium leak channel non-selective protein isoform x1 | GO:0005244 GO:0005262 GO:0006816 GO:0016021 GO:0034220 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_62.1_06839.t1 | 3 | 1 | Ion_trans | 236 | 257 | 2.2e-33 | 115.1 | 0.053 | 790.0 | -0.9 |
| pfu_aug2.0_62.1_06839.t1 | 3 | 2 | Ion_trans | 272 | 503 | 2.2e-33 | 115.1 | 1.9e-32 | 2.8e-28 | 98.5 |
| pfu_aug2.0_62.1_06839.t1 | 3 | 3 | Ion_trans | 594 | 661 | 2.2e-33 | 115.1 | 6.5e-10 | 9.6e-06 | 24.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_62.1_06839.t1 | gi|759054553|ref|XP_011336484.1| | PREDICTED: sodium leak channel non-selective protein isoform X5 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_62.1_06839.t1 | gi|749772980|ref|XP_011141956.1| | PREDICTED: sodium leak channel non-selective protein isoform X1 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_62.1_06839.t1 | gi|752884600|ref|XP_011260047.1| | PREDICTED: sodium leak channel non-selective protein [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_62.1_06839.t1 | gi|759054547|ref|XP_011336481.1| | PREDICTED: sodium leak channel non-selective protein isoform X2 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_62.1_06839.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06839.t1 atggttagattgtacaaggtgataggagattttgagattgccgaagttagagatagttttatgcgacagttcaccaatcc ggagattaacctgactatagacatacaggaaaacacagacgatactgtggttttatccaaaccgtccccggttaaacttg tacggataataagtacagctcctaaaagtgggggagtggtggagaaacgtagtggaatatctcatatagtcagggattct gcccagcagaagatgcaggtgtgtggatccagtcagcttgtaccgtctggtcctaaatcattactggctcagcagttcca gctcagaatggacagaaggagtatgagaggctccaggccaggaagtcttaagactcggacaacagccaaagaaaatggtg acattaacctgagtagtctggttaataactcggctaaccgggtcagccataaccgagaatttgacatccgagtctggcaa caaaagaaacaacaggcagagattaaaaggaatcagctagaagaagacatgagagagaaccaccctttctttgacacgcc tcttttcatcgttgggagggagacaaagttccgtaagatatgccaagccattgtcaaagccaagtacaactacgtaacaa gggacccgataacagggaaagagacctacagcagatgcaaaacattccataagctgctaggattggtttcctacctagat tgggctatggttgttgtcaccatcctctcttgcatatccatgatgtttgagaatgcacagaacctgatcatgtttaatga tccacttaaggtagcagagtatgtgtttgtgctgtgtatgagtgtagagatgggacttaaggtgatggccaatggattat tcttcacacccaaagctgtcgttaaagacttcggaggaggattggatctcttcatttactctaccagtttgatattcctg tgttggatgcctaaggaagtcccccctctatccggagcacagaccctcatgttgttacgatgtcttaggccacttagaat atttgtcctggttccgcacatgaggaaagtggtgtacgaattcttcagaggattcaaagaaatcagtctggtatttatcc tgctgatagcgttgatgtttgtgtttgccacgtttggagttcacctactgggaggacgtttggccaggtgtaatgatcct gccattagtgttaaggaaaactgtacaggaatgttctttactagagtgtatgtcacaaagatgaaggtgaacatggatgt tgatgaactaccaggattttatgtcccaagaacttggtccaatcctcacaactttaactttgatagaataagtaatgcca tgttagctatgtttgaagtgctgtcattggagggttggttagaggtcagggatgtcatagaaagagttgatccagtgcat gccttgtatgtacatgtgtttgtgtttattggttacatgatattcctgaccctgtttgtgggtgtggtcatagccaacta cagtgaaaataagggtacagcgttattgaccgttgatcagagaagatggctggatttaaaaggaaggatcaagctgaatc aaccattacatattccaccaaggcctgatggcactgggtttagagcacggatgtacgacattacacaacataagatgttt aaacgagccgttgtcattctagttcttctaaactgtggtctcctctctgtaccgtggaaggagaagaataaaggtgtagc agatatactggccagtatctccactgtattcacactactcttcctggtagaggttacaatgaaagttatagctatgtcgc cacgtggttactggacaagtagaaggaaccgcttcgatatgtttgttaccttccttggactgatctggattgtccttaat tttactcttggtaatgacactagttactcgtttggatttgtagtgattgtactgcgattctttaccatggctggaaaaca t |
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Protein
| Protein ID | pfu_aug2.0_62.1_06839.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06839.t1 MVRLYKVIGDFEIAEVRDSFMRQFTNPEINLTIDIQENTDDTVVLSKPSPVKLVRIISTAPKSGGVVEKRSGISHIVRDS AQQKMQVCGSSQLVPSGPKSLLAQQFQLRMDRRSMRGSRPGSLKTRTTAKENGDINLSSLVNNSANRVSHNREFDIRVWQ QKKQQAEIKRNQLEEDMRENHPFFDTPLFIVGRETKFRKICQAIVKAKYNYVTRDPITGKETYSRCKTFHKLLGLVSYLD WAMVVVTILSCISMMFENAQNLIMFNDPLKVAEYVFVLCMSVEMGLKVMANGLFFTPKAVVKDFGGGLDLFIYSTSLIFL CWMPKEVPPLSGAQTLMLLRCLRPLRIFVLVPHMRKVVYEFFRGFKEISLVFILLIALMFVFATFGVHLLGGRLARCNDP AISVKENCTGMFFTRVYVTKMKVNMDVDELPGFYVPRTWSNPHNFNFDRISNAMLAMFEVLSLEGWLEVRDVIERVDPVH ALYVHVFVFIGYMIFLTLFVGVVIANYSENKGTALLTVDQRRWLDLKGRIKLNQPLHIPPRPDGTGFRARMYDITQHKMF KRAVVILVLLNCGLLSVPWKEKNKGVADILASISTVFTLLFLVEVTMKVIAMSPRGYWTSRRNRFDMFVTFLGLIWIVLN FTLGNDTSYSFGFVVIVLRFFTMAGKH |
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