Gene
| Gene Model ID | pfu_aug2.0_62.1_06840 |
|---|---|
| Locus | scaffold62.1 : 16293 ... 34215 : - |
| To GenomeBrowser | scaffold62.1:16293..34215 |
| Genes list of scaffold | scaffold62.1 |
| Synonym | pfu_aug1.0_3169.1_30359 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium leak channel non-selective protein isoform x2 | GO:0005216 GO:0006812 GO:0016020 GO:0034220 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_62.1_06840.t1 | 4 | 1 | Ion_trans | 51 | 62 | 0.0 | 176.2 | 0.66 | 9800.0 | -4.5 |
| pfu_aug2.0_62.1_06840.t1 | 4 | 2 | Ion_trans | 85 | 329 | 0.0 | 176.2 | 6.9e-36 | 1.0e-31 | 109.7 |
| pfu_aug2.0_62.1_06840.t1 | 4 | 3 | Ion_trans | 395 | 403 | 0.0 | 176.2 | 0.18 | 2600.0 | -2.6 |
| pfu_aug2.0_62.1_06840.t1 | 4 | 4 | Ion_trans | 428 | 595 | 0.0 | 176.2 | 4.7e-27 | 7.0e-23 | 80.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_62.1_06840.t1 | gi|759054551|ref|XP_011336483.1| | PREDICTED: sodium leak channel non-selective protein isoform X4 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_62.1_06840.t1 | gi|759054549|ref|XP_011336482.1| | PREDICTED: sodium leak channel non-selective protein isoform X3 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_62.1_06840.t1 | gi|759054545|ref|XP_011336479.1| | PREDICTED: sodium leak channel non-selective protein isoform X1 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_62.1_06840.t1 | gi|749772983|ref|XP_011141957.1| | PREDICTED: sodium leak channel non-selective protein isoform X2 [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_62.1_06840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06840.t1 atgcagaccacatttgttccggcgctgtccaaaatgttggtcaatcggaaaaccagctttaaagatagtcatcctctctc ggattatgggccggatgagaatttaaacgacaatgttgacatagattgggttaacaaggtgtgggtacgtcggttgttac ggatactggcgttagttagtgtaatctccgttagtatgaatacaccaaagacgtttgaagagtataggacgttaatgtat gtgaccttcactgctgaccttgtggtgacctttgtctttactgctgagatgatagcaaagatgcagataagagggattat caagggtgaggcaccatatattaaagacagatggtgtcagtttgatggctgtatggttctgtttctttggatttctgtca ttttacaggtattagagatgacaacattagtaccgccctatacatactggtcaatactacgattcccgcgcccactcata ctgatcagagtcctcagaatgtttctcaagttccagctaccaaagcaaaggatcaactctatcttcaagcgctcgagcca gcagatttacaatgtgaccttgtttttcctgttcttcatgtcattatatggaatcttgggagttcaattctttggtgaac tgaagtatcactgtgttttaccagatactgatccagagaatgtgaccatcaatgaccttgctgtaccagactcgtactgc tctccggacccaggatatggttatcaatgtccctcagaaatggtctgcatggaattgaaactaactaaaagtcaaggagg attcaatggatttgatgaaatagctaccagttttttcacggtatacgaggcagcctcacaggaaggttgggtattgttga tgtaccgtgccgtggatagtctacgatcagagaaagccatcatatactttgtcactctcatcttcctaatcgcttggctg gtcaagaacatttttattgccgttatcattgagtcatttgcggagattcgagtccaattccaacaaatgtggggatcaag aggcagtgctgcagactctgactcatcacaggtaatacagtcagatgggaccacgtggaaaatggtgatgttagacgaga ataaagcgaaaggattcgctcctccgtttttccaaagaatcctatgttccaacattttccacacctttttcctgatactt gtgctagctaacgtcataataggagctctgttgtcgtttgatggttttaaggatcctaaccaaaagtgggactatttcta ttatgcagaggtggttttcacaatcttctttgatctggaggcacttttcaagatctggtgtctgggaattaaaggctatc tacggagacacttccatagatttgaaatatccttggccattggtacaacactacatattattccaaagttgtacaggtca caattcacctatttccaggtcctgagaatttgcaggttgattaaagcatcaccaatgttagaagatttctgtttcaagat atttgggccggggaggaagattggcagtctgatagttttcaccatctgtctcctgattatattctccagtatcagtctcc agctattctgctccatacaagatttctccaaattttctacatttccagaggccttcatgtcaatgtttcaaatcttagcc aataaagggtggacagagataatgcaaattaccatgtggaggacaggggaacaaattgcaccccttgtcgctatttattt catattctaccatctattcgtaactttgacatctgtcactgttaaagtcattagaaaagagaggtag |
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Protein
| Protein ID | pfu_aug2.0_62.1_06840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06840.t1 MQTTFVPALSKMLVNRKTSFKDSHPLSDYGPDENLNDNVDIDWVNKVWVRRLLRILALVSVISVSMNTPKTFEEYRTLMY VTFTADLVVTFVFTAEMIAKMQIRGIIKGEAPYIKDRWCQFDGCMVLFLWISVILQVLEMTTLVPPYTYWSILRFPRPLI LIRVLRMFLKFQLPKQRINSIFKRSSQQIYNVTLFFLFFMSLYGILGVQFFGELKYHCVLPDTDPENVTINDLAVPDSYC SPDPGYGYQCPSEMVCMELKLTKSQGGFNGFDEIATSFFTVYEAASQEGWVLLMYRAVDSLRSEKAIIYFVTLIFLIAWL VKNIFIAVIIESFAEIRVQFQQMWGSRGSAADSDSSQVIQSDGTTWKMVMLDENKAKGFAPPFFQRILCSNIFHTFFLIL VLANVIIGALLSFDGFKDPNQKWDYFYYAEVVFTIFFDLEALFKIWCLGIKGYLRRHFHRFEISLAIGTTLHIIPKLYRS QFTYFQVLRICRLIKASPMLEDFCFKIFGPGRKIGSLIVFTICLLIIFSSISLQLFCSIQDFSKFSTFPEAFMSMFQILA NKGWTEIMQITMWRTGEQIAPLVAIYFIFYHLFVTLTSVTVKVIRKER |
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