Gene
| Gene Model ID | pfu_aug2.0_62.1_06845 |
|---|---|
| Locus | scaffold62.1 : 123616 ... 129517 : + |
| To GenomeBrowser | scaffold62.1:123616..129517 |
| Genes list of scaffold | scaffold62.1 |
| Synonym | pfu_aug1.0_20055.1_33064 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_62.1_06845.t1 | 1 | 1 | Lectin_C | 295 | 404 | 1.3e-11 | 45.0 | 1.4e-15 | 2.0e-11 | 44.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_62.1_06845.t1 | gi|625228430|ref|XP_007653389.1| | PREDICTED: CD209 antigen-like protein C isoform X1, partial [Cricetulus griseus] | 2.0e-12 |
| pfu_aug2.0_62.1_06845.t1 | gi|28374182|gb|AAH46292.1| | Cd209f protein, partial [Mus musculus] | 2.0e-12 |
| pfu_aug2.0_62.1_06845.t1 | gi|568953465|ref|XP_006508930.1| | PREDICTED: CD209f antigen isoform X1 [Mus musculus] | 2.0e-12 |
| pfu_aug2.0_62.1_06845.t1 | gi|68534098|gb|AAH99497.1| | Cd209f protein, partial [Mus musculus] | 4.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_62.1_06845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06845.t1 atgggcatatctcatgttggtagagcagcctttgttaggacacaacctgctgccagagttgtagttcagggagctaaagg tggcctcgtgcatggaggcagggtggtagcaaatggagtaaaaggcgttgccgttgcaggccaccatggaggttttggtg cagtaagcggtgctggatggggcgctggagccggtaaacagcagattgtttatcctgcttcaaaacacgttggtgttgta tctagtggagcaggattcggtatttcaggtccagcgaaaaaggtccatggtgtggtatcaacgggaggagctggatgggc caccggaggtggtcacaaacaagtggtgtatccagcccctaacaaagctgtaggtgtgatatctaaaggtggggcaggat ggggctctgctggtgcaagatttgtatctaccggtggattcggtggtgcaagtggtcataaaaagattgttggcgccgga ctgatccgttcaggtggaggtggatggggccttagttctggaaataatgctctttacccagcaccacaaaagaaggtagt tgctagccctgtttacccagctcctcagaagaaagtgattgccagccctgtttacccagctgctcagaaaaaagtggtca ccagcgccatttatcaagctccgcaaaagaaagtggttgtcagcgctggaggaagctatccccatggaaatgtacaagca gttggtggtcatggctacttccctgatgttgctcctggactacaaggatatggaaagggagtgtactacaaacaagtggc taacgttggtccaatggctgtaagctgcccttatggatggcagtactaccatggttcttgttactacttcagcagagata gactctcttggtgggaggcatacgctaaatgtactttcatgggaggatacctggcaatggtgaactacgctcatgaaaat agttacctaaaactcatgagcaagaaaatgaattttgaggatggtgcctggtttggtctcaatgatattctgtttccaaa aactcatacatggtactggggatttggtaagaaaggatgtaaatggtttgactggtttggaaagggaccaaaatacaggg gagcagacaataactgcgtttgttttcaggaagattaccattaccaatggggtgtcaacagctgccaaacaaagatgtac tatatttgcgaacttaaccctgtaagtaaattctaa |
|
Protein
| Protein ID | pfu_aug2.0_62.1_06845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06845.t1 MGISHVGRAAFVRTQPAARVVVQGAKGGLVHGGRVVANGVKGVAVAGHHGGFGAVSGAGWGAGAGKQQIVYPASKHVGVV SSGAGFGISGPAKKVHGVVSTGGAGWATGGGHKQVVYPAPNKAVGVISKGGAGWGSAGARFVSTGGFGGASGHKKIVGAG LIRSGGGGWGLSSGNNALYPAPQKKVVASPVYPAPQKKVIASPVYPAAQKKVVTSAIYQAPQKKVVVSAGGSYPHGNVQA VGGHGYFPDVAPGLQGYGKGVYYKQVANVGPMAVSCPYGWQYYHGSCYYFSRDRLSWWEAYAKCTFMGGYLAMVNYAHEN SYLKLMSKKMNFEDGAWFGLNDILFPKTHTWYWGFGKKGCKWFDWFGKGPKYRGADNNCVCFQEDYHYQWGVNSCQTKMY YICELNPVSKF |
|