Gene
| Gene Model ID | pfu_aug2.0_62.1_06846 |
|---|---|
| Locus | scaffold62.1 : 143246 ... 148429 : + |
| To GenomeBrowser | scaffold62.1:143246..148429 |
| Genes list of scaffold | scaffold62.1 |
| Synonym | pfu_aug1.0_8516.1_02609 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_62.1_06846.t1 | 1 | 1 | Lectin_C | 118 | 215 | 1.0e-07 | 32.5 | 9.8e-12 | 1.5e-07 | 32.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_62.1_06846.t1 | gi|260793342|ref|XP_002591671.1| | hypothetical protein BRAFLDRAFT_80760 [Branchiostoma floridae] | 5.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_62.1_06846.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06846.t1 atgaagatctttacctcaatactgctatcttgcatcgcagtgttcgtctcaggcgaacccggtacagtgggttatccggg gtgggtagcacaaggactctatcctcctccaagtggcggacatgtatcaggaggaggggtagtatctggaggaggggtag tatctggtggaggttttgtatctggtggaaagggagtaatttatccaccatctcatggtaaacanattactacaagcaag ttgccaatgttggtccgatggctgttagttgtccttatggttggcagtactaccacggatcttgttattacttcagcaga gataggcttacctggtggcatgcatatctttatgggaggatatctggcaatggttaactacgctcatgaaaactcctact taaaactcatgtgcaagaagatgaaatttgatgatggtgcttggtttggtctaaatgatatcttattccccaaaactcat acatggtactggggatttggtaagaaagggtgtaaatggtttgactggtttggaaagggaccaaaatacaggggagctga taataactgtgtttgcttcaaggaagattacaaataccaatgggccgtcagtagctgccacacaaaactgtactacatct gcgaactcaaccctaagaaaccatgcaaatgtggatactaa |
|
Protein
| Protein ID | pfu_aug2.0_62.1_06846.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06846.t1 MKIFTSILLSCIAVFVSGEPGTVGYPGWVAQGLYPPPSGGHVSGGGVVSGGGVVSGGGFVSGGKGVIYPPSHGKXITTSK LPMLVRWLLVVLMVGSTTTDLVITSAEIGLPGGMHIFMGGYLAMVNYAHENSYLKLMCKKMKFDDGAWFGLNDILFPKTH TWYWGFGKKGCKWFDWFGKGPKYRGADNNCVCFKEDYKYQWAVSSCHTKLYYICELNPKKPCKCGY |
|