Gene
| Gene Model ID | pfu_aug2.0_62.1_06847 |
|---|---|
| Locus | scaffold62.1 : 175610 ... 206399 : + |
| To GenomeBrowser | scaffold62.1:175610..206399 |
| Genes list of scaffold | scaffold62.1 |
| Synonym | pfu_aug1.0_215.1_36399 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_62.1_06847.t1 | 2 | 1 | Lectin_C | 149 | 258 | 6.5e-19 | 68.5 | 2.4e-14 | 8.9e-11 | 42.3 |
| pfu_aug2.0_62.1_06847.t1 | 2 | 2 | Lectin_C | 286 | 389 | 6.5e-19 | 68.5 | 3.8e-11 | 1.4e-07 | 32.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_62.1_06847.t1 | gi|291221925|ref|XP_002730977.1| | PREDICTED: macrophage mannose receptor 1-like [Saccoglossus kowalevskii] | 1.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_62.1_06847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06847.t1 atggcacaaagtgaaccgggaactgcaaattatcctacatggacacgtatgggtatttatcctggtccaggtggtggatc atcaggtggacatggaggtggatttgttagtggaggtggatttggtggagttaaaggcggcgtaatgtttggaggtggtc atggaggtggatttgtcagtggaggtggatttggtggaggcggctttggaaagaaaggtgttgtctatcccaaaaaaggt gttatccctggtggaaaatatcctcatggaaacgttcaaaaagtcggaggacatggctacttccctgatgttgcccctgg tcttaaaggatacggaaagggacattattacaagcaagttgccaatgttggtccgatggctgttagttgtccttatggtt ggcagtactaccacggatcttgttattacttcagcagagataggcttacctggtggcatgcatatgcaaaatgtagcttt atgggaggatatctggcaatggttaactacgctcatgaaaactcttacttaaaactcatgtgcaagaagatgaaatttga tgatggtgcttggtttggtctcaatgacatcttattccccaaaactcatacatggtactggggatttggtaagaaaggat gtaaatggtttgactggtttggaaagggaccaaaatacaggggaaaagactacaattgtgtttgctttaaggaagattac cactaccaatgggccgtcagtagctgccacacaaaactatattacatctgcgaactcaaccccgtgaaccgggaactgca aattatcctacatggacacgtatgggtatttatcctggtccaggaggtggatcatcaggcaaaatgtggctttatgggtg gatatctggcaatggttaactacgctcatgaaaactcctacttaaaactcatgtgcaagaagatgaaatttgatgatggt gcttggtttggtctgaatgatatcttattccccaaaactcatacatggtactggggatttggtaagaaaggatgtaaatg gtttgactggtttggaaagggaccaaaatacaggggaacagactacaattgtgtttgctttaaggaagattaccactacc aatgggccgtcagtagctgccacacaaaactgtattacatctgcgaactcaaccccaagaaaccatgcaaatgtggatac taa |
|
Protein
| Protein ID | pfu_aug2.0_62.1_06847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06847.t1 MAQSEPGTANYPTWTRMGIYPGPGGGSSGGHGGGFVSGGGFGGVKGGVMFGGGHGGGFVSGGGFGGGGFGKKGVVYPKKG VIPGGKYPHGNVQKVGGHGYFPDVAPGLKGYGKGHYYKQVANVGPMAVSCPYGWQYYHGSCYYFSRDRLTWWHAYAKCSF MGGYLAMVNYAHENSYLKLMCKKMKFDDGAWFGLNDILFPKTHTWYWGFGKKGCKWFDWFGKGPKYRGKDYNCVCFKEDY HYQWAVSSCHTKLYYICELNPVNRELQIILHGHVWVFILVQEVDHQAKCGFMGGYLAMVNYAHENSYLKLMCKKMKFDDG AWFGLNDILFPKTHTWYWGFGKKGCKWFDWFGKGPKYRGTDYNCVCFKEDYHYQWAVSSCHTKLYYICELNPKKPCKCGY |
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