Gene
| Gene Model ID | pfu_aug2.0_62.1_06851 |
|---|---|
| Locus | scaffold62.1 : 294750 ... 319459 : + |
| To GenomeBrowser | scaffold62.1:294750..319459 |
| Genes list of scaffold | scaffold62.1 |
| Synonym | pfu_aug1.0_215.1_36395 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_62.1_06851.t1 | 1 | 1 | Lectin_C | 242 | 353 | 5.4e-13 | 49.4 | 1.1e-16 | 8.0e-13 | 48.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_62.1_06851.t1 | gi|672026413|ref|XP_006221294.2| | PREDICTED: CD209 antigen-like protein E isoform X2 [Rattus norvegicus] | 1.0e-14 |
| pfu_aug2.0_62.1_06851.t1 | gi|672026411|ref|XP_002724816.3| | PREDICTED: CD209 antigen-like protein 2 isoform X1 [Rattus norvegicus] | 2.0e-14 |
| pfu_aug2.0_62.1_06851.t1 | gi|110290609|emb|CAL15171.1| | SIGNR7 protein precursor [Mus musculus] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_62.1_06851.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06851.t1 atgaaggaggtcaacaacaaccaggattccttgccttccttacctgcacttcttcctgatgatggaatatctatggatac aaatgccacagaaagccagggagcctctgaagcaagagattcctatgctaaagaaccatccttaaagaaagctagatcag ctatgtctgaattagccattcgaagcgaactagggcaggcaggttatcctgtatgggacagtctcggtataacacatggt ggagtgtcaagcggtggggctgtcgtgtctggtggtggtggtgttcaccatggcggagtagtacatggtggtggtggtgt tcaccatggcaagaagggtgtggtctatcctccccatcatctgaagaaaggcggagtagtacatggcggtggtattgtac acggaggagttgtcgggggtggttttggaaagaaaggtgtggtctatcctcctcatcatccaaagaaaggtgttgtctat cctcctcatcatccaaagaaaggtgtagtctatcctcacataccaaagaaaggtggaggtaaatatccccatggaaacgt acatgttgttggaggacatggttatttcccagataagccacctggagccaaaggatacggaaagggacattactacaagc aggtcgcaaatgtcggtcctatggctgttagttgtccttatggttggcagtactatcacggatcttgttattacttcagt agagaaagaatgacctggtggcaagcatatgccaagtgcaattttatgggaggctacctagccatggtaaactacgctca tgaaaattcctacttaaagctcatgtgtaagaaaatgaaatttcacgacggcgcctggttcggacttaacgatgtgttat tccccaaaactcatacttggtactggggattcggaaagaaaggatgtaaatggtttgactggtttggaaagggaccaaac ttcaggggtggagataaaaactgcgtctgtttcaaagaggactatcactacaaatgggctaccgcaagctgtacaactaa gctgtactacatctgtgaactgaatcctaaaaagccttgcaaatgtgggtattag |
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Protein
| Protein ID | pfu_aug2.0_62.1_06851.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06851.t1 MKEVNNNQDSLPSLPALLPDDGISMDTNATESQGASEARDSYAKEPSLKKARSAMSELAIRSELGQAGYPVWDSLGITHG GVSSGGAVVSGGGGVHHGGVVHGGGGVHHGKKGVVYPPHHLKKGGVVHGGGIVHGGVVGGGFGKKGVVYPPHHPKKGVVY PPHHPKKGVVYPHIPKKGGGKYPHGNVHVVGGHGYFPDKPPGAKGYGKGHYYKQVANVGPMAVSCPYGWQYYHGSCYYFS RERMTWWQAYAKCNFMGGYLAMVNYAHENSYLKLMCKKMKFHDGAWFGLNDVLFPKTHTWYWGFGKKGCKWFDWFGKGPN FRGGDKNCVCFKEDYHYKWATASCTTKLYYICELNPKKPCKCGY |
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