Gene
| Gene Model ID | pfu_aug2.0_62.1_06858 |
|---|---|
| Locus | scaffold62.1 : 439610 ... 466462 : - |
| To GenomeBrowser | scaffold62.1:439610..466462 |
| Genes list of scaffold | scaffold62.1 |
| Synonym | pfu_aug1.0_2973.1_59081 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hematopoietically-expressed homeobox protein hhex | GO:0005634 GO:0006355 GO:0043565 GO:0044763 GO:0048731 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_62.1_06858.t1 | 1 | 1 | Homeobox | 163 | 215 | 4.9e-21 | 74.1 | 2.3e-24 | 8.4e-21 | 73.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_62.1_06858.t1 | gi|259013390|ref|NP_001158402.1| | hematopoietically expressed homeobox [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_62.1_06858.t1 | gi|45361685|ref|NP_989420.1| | hematopoietically-expressed homeobox protein hhex [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_62.1_06858.t1 | gi|213625781|gb|AAI71323.1| | hematopoietically expressed homeobox [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_62.1_06858.t1 | gi|213513417|ref|NP_001133335.1| | hematopoietically-expressed homeobox protein hhex [Salmo salar] | 0.0 |
| pfu_aug2.0_62.1_06858.t1 | gi|742203454|ref|XP_010894174.1| | PREDICTED: hematopoietically-expressed homeobox protein HHEX [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_62.1_06858.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06858.t1 atgttgcatccagctatggcacaacatcctgccttcacatcgctatatacaccaacccatctccaccctgaacagacctc accctcgggatcatcaaaccacgccggagaaacagccacacctcatggacactcatctttcaggattgccgatatactgg ctacttcttcaacaagtgacaatgttcaggcagctctagcaaaaccaacaccgataaaccccgccgcattgcacgcgggg gcattgactgctacctccctgtacaaacctatccccatgtatgaccccaccgtcatgcctcacaccccatacctcccttc acatctaggatacacgggaactttggtgaaccagatgtacccaatgtcatatatgagaccagaatatgcctttttggaaa gacatccttttatgaaagttggccctaagcccttcttttggaatcactttatgcagagaccacttcataaaagaaaaggt ggacaagtacgattctcaaatgaccagactgtggaactggagaagaaattcgattcccagaagtacttatctcctccaga aagaaaacgacttgcaaaattattacaactaacagaaagacaggttaaaacttggtttcaaaatcgtagagcaaaatgga ggcgtttgaaacaggaatcacctacatgtgaaaaacaagaagaggcacaaggtcaaggtgatgatgacaaaatggacgcc aaagaactggaatataaaaatcagtgtacgtctgatgaagatgactttgatgtagatgagtcggacgatgaaatagatgt tgttaaagatgaaaatgaaaaagataacaacagataa |
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Protein
| Protein ID | pfu_aug2.0_62.1_06858.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06858.t1 MLHPAMAQHPAFTSLYTPTHLHPEQTSPSGSSNHAGETATPHGHSSFRIADILATSSTSDNVQAALAKPTPINPAALHAG ALTATSLYKPIPMYDPTVMPHTPYLPSHLGYTGTLVNQMYPMSYMRPEYAFLERHPFMKVGPKPFFWNHFMQRPLHKRKG GQVRFSNDQTVELEKKFDSQKYLSPPERKRLAKLLQLTERQVKTWFQNRRAKWRRLKQESPTCEKQEEAQGQGDDDKMDA KELEYKNQCTSDEDDFDVDESDDEIDVVKDENEKDNNR |
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