Gene
| Gene Model ID | pfu_aug2.0_62.1_06863 |
|---|---|
| Locus | scaffold62.1 : 562038 ... 584848 : - |
| To GenomeBrowser | scaffold62.1:562038..584848 |
| Genes list of scaffold | scaffold62.1 |
| Synonym | pfu_aug1.0_22387.1_54829 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_62.1_06863.t1 | 9 | 1 | Sushi | 4 | 56 | 0.0 | 203.3 | 4.7e-11 | 3.5e-07 | 30.4 |
| pfu_aug2.0_62.1_06863.t1 | 9 | 2 | Sushi | 71 | 112 | 0.0 | 203.3 | 1.1e-06 | 0.0085 | 16.4 |
| pfu_aug2.0_62.1_06863.t1 | 9 | 3 | Sushi | 117 | 169 | 0.0 | 203.3 | 1.2e-11 | 9.1e-08 | 32.3 |
| pfu_aug2.0_62.1_06863.t1 | 9 | 4 | Sushi | 174 | 227 | 0.0 | 203.3 | 1.9e-12 | 1.4e-08 | 34.9 |
| pfu_aug2.0_62.1_06863.t1 | 9 | 5 | Sushi | 232 | 284 | 0.0 | 203.3 | 3.9e-13 | 2.9e-09 | 37.1 |
| pfu_aug2.0_62.1_06863.t1 | 9 | 6 | Sushi | 289 | 341 | 0.0 | 203.3 | 3.0e-09 | 2.2e-05 | 24.7 |
| pfu_aug2.0_62.1_06863.t1 | 9 | 7 | Sushi | 360 | 397 | 0.0 | 203.3 | 2.2e-10 | 1.6e-06 | 28.3 |
| pfu_aug2.0_62.1_06863.t1 | 9 | 8 | Sushi | 402 | 450 | 0.0 | 203.3 | 4.6e-08 | 0.00034 | 20.8 |
| pfu_aug2.0_62.1_06863.t1 | 9 | 9 | Sushi | 459 | 511 | 0.0 | 203.3 | 2.7e-09 | 2.0e-05 | 24.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_62.1_06863.t1 | gi|585650438|ref|XP_006814579.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_62.1_06863.t1 | gi|543375245|ref|XP_005530835.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Pseudopodoces humilis] | 0.0 |
| pfu_aug2.0_62.1_06863.t1 | gi|507932516|ref|XP_004677499.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Condylura cristata] | 0.0 |
| pfu_aug2.0_62.1_06863.t1 | gi|449514024|ref|XP_004174416.1| | PREDICTED: LOW QUALITY PROTEIN: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Taeniopygia guttata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_62.1_06863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06863.t1 tgttagcagtctgtggtgagccatccactataactgacggttccatcacggggagtggatataaccatggcgatacgcgg acgtatagctgtgaaccggggtatgttatgtatggatgctcattgtccatatgtaaatccgacgacacctggtcctccac accaacatgtggaagaagaaattgttattcgccgccttatgtctggaactcctacaggagcggaaatgggacacgtcttt atgactaccagaggtacacgtgtgtcacaggttacgaaataattggagaggatattatttactgcggtgtatcgggctgg gactctgccccacaatgcaataaagttgactgtggaaaccctccggacatttccttcggaagttggatagcaccatatac cacctatctggacaatgcaacctattcatgtgaccatggttataatatatccgggtcaccagtcgccacatgtaaagaga caaaagcctggattactcctccaacatgtctcggggtcagttgtggcacacccccatcgttggcaaacggagcagttcaa tcaagcacggttacccgttaccctaatacagcgacctacatgtgtacaagtggatatgacatggttgggtcagacactat cagttgccaagcaaatcagaattggacgtcgttaccaatttgtagagtgcgtgtttgtggatctccgtcgtcaatccaaa atgggaatgtagtattcgatggaaatgacttcggtgatattgcaaactatagctgtaatactggctacactcttgtcggt tcaccatccatacaatgcctctccactgctaattgggaagcggctccaacctgtgcagttgttgattgtgggacaatacc agtagtgtcagacagctcgtccactggaacaacaacaacctaccagtcatcatggcagtattcctgtaatccaggtttca atttgtatggtttggacactgttacttgtgactctagtgcttcatggggcacaccaccagtctgttatgttccttgtgtt gtcgatcccgtaatagttaattcggtaatatccggaagtggcactgcttacctagataccagggtgatccagtgtgacat aggatatgacttacagggatcagacacggtaacttgtcagatgaatggacaatggagcaccctgccaacgtgtgtcattg ttagctgtggttcacctggcacgattcagaatgggtacatcaacgatacagggactgattatctggagaccaagtccata gtttgtgatgacggatatgaagtgatcggtgacactactataacatgcctacatactggactttggtcaacgattcagga ttgcacaagaattgaatgcttcccacctccagcagttgacaatggttggtatgaagggacagggttatatgttaatgaca ataggacttacttctgtaaccatggatacgaacttatgggagattatgtagtattttgccaggaaaacaggacatggtct ggatcaccatactgtgttccaaatatctgtgattaccctacaaattttacattcgatatttctggctcaacactgaatga gacagcgagagcagcccttgacgaaaaactgaaaagtataagacaattactgctcctcaataagaaactattgaccaaaa atgttttgaagcatgtgagtgtgtacgagaagcgccagacgccattatctataggacttgcttggggagtgctgcttggt gtactatttttagtatttgttttgatcccggacctacctagaatgtggcatgatatagttcattcaccatttagcatgtt tagatga |
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Protein
| Protein ID | pfu_aug2.0_62.1_06863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_62.1_06863.t1 LAVCGEPSTITDGSITGSGYNHGDTRTYSCEPGYVMYGCSLSICKSDDTWSSTPTCGRRNCYSPPYVWNSYRSGNGTRLY DYQRYTCVTGYEIIGEDIIYCGVSGWDSAPQCNKVDCGNPPDISFGSWIAPYTTYLDNATYSCDHGYNISGSPVATCKET KAWITPPTCLGVSCGTPPSLANGAVQSSTVTRYPNTATYMCTSGYDMVGSDTISCQANQNWTSLPICRVRVCGSPSSIQN GNVVFDGNDFGDIANYSCNTGYTLVGSPSIQCLSTANWEAAPTCAVVDCGTIPVVSDSSSTGTTTTYQSSWQYSCNPGFN LYGLDTVTCDSSASWGTPPVCYVPCVVDPVIVNSVISGSGTAYLDTRVIQCDIGYDLQGSDTVTCQMNGQWSTLPTCVIV SCGSPGTIQNGYINDTGTDYLETKSIVCDDGYEVIGDTTITCLHTGLWSTIQDCTRIECFPPPAVDNGWYEGTGLYVNDN RTYFCNHGYELMGDYVVFCQENRTWSGSPYCVPNICDYPTNFTFDISGSTLNETARAALDEKLKSIRQLLLLNKKLLTKN VLKHVSVYEKRQTPLSIGLAWGVLLGVLFLVFVLIPDLPRMWHDIVHSPFSMFR |
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